CFinderADM000840 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| mitochondrial outer membrane | 1.49E-05 | GO:0005741 |
| Transcription regulator: IWS1 | 0.011075627 | gene family |
| Transcription factor: WRKY | 0.045128656 | gene family |
| pyruvate decarboxylation to acetyl CoA | 0.004024024 | plantCyc |
| Pyruvate_metabolism | 0.02434114 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g088610.2 | GroES-like family protein | AT3G60210 (4.00E-53) |
| Solyc02g067460.2 | voltage dependent anion channel 1 | AT3G01280 (8.00E-117) |
| Solyc03g058920.2 | voltage dependent anion channel 1 | AT3G01280 (5.00E-115) |
| Solyc05g009530.2 | 2-oxoacid dehydrogenases acyltransferase family protein | AT3G25860 (2.00E-163) |
| Solyc07g066220.2 | WRKY DNA-binding protein 2 | AT5G56270 (4.00E-142) |
| Solyc08g075890.2 | Protein kinase superfamily protein | AT4G19110 (1.00E-174) |
| Solyc11g005450.1 | Transcription elongation factor (TFIIS) family protein | AT5G09850 (4.00E-69) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000567 | microtubule steroid biosynthetic process metabolic process microtubule-based process pyruvate decarboxylation to acetyl CoA 26,27-dehydrozymosterol metabolism plant sterol biosynthesis Steroid_biosynthesis Pyruvate_metabolism Nicotinate_and_nicotinamide_metabolism | details |
| CFinderADM000865 | tryptophan metabolic process tryptophan synthase activity transferase activity, transferring acyl groups oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor NAD binding magnesium ion binding stearate biosynthesis II (bacteria and plants) fatty acid elongation -- saturated fatty acid biosynthesis initiation I octanoyl-ACP biosynthesis (mitochondria, yeast) leucine biosynthesis tryptophan biosynthesis sucrose degradation III (sucrose invertase) pyruvate decarboxylation to acetyl CoA Benzoxazinoid_biosynthesis Fatty_acid_biosynthesis Fatty_acid_biosynthesis Valine,_leucine_and_isoleucine_biosynthesis Pyruvate_metabolism Biotin_metabolism Phenylalanine,_tyrosine_and_tryptophan_biosynthesis | details |
| CFinderADM000913 | details | |
| CFinderADM000968 | structural constituent of ribosome ribosome translation intracellular mitochondrial outer membrane lyase activity lysine biosynthesis VI Monobactam_biosynthesis | details |
| CFinderADM001069 | proton-transporting two-sector ATPase complex, proton-transporting domain PPC:4.2.1: Calcium Dependent Protein Kinase Transcription factor: WRKY ATP hydrolysis coupled proton transport | details |
| CFinderADM001210 | CTP biosynthetic process nucleoside_diphosphate_phosphorylation UTP biosynthetic process GTP biosynthetic process nucleoside diphosphate kinase activity ubiquitin protein ligase binding PPC:4.2.1: Calcium Dependent Protein Kinase E3 adaptor: Cullin pyrimidine deoxyribonucleotide phosphorylation CMP phosphorylation purine deoxyribonucleosides salvage adenosine deoxyribonucleotides de novo biosynthesis UTP and CTP de novo biosynthesis guanosine ribonucleotides de novo biosynthesis guanosine deoxyribonucleotides de novo biosynthesis I pyrimidine deoxyribonucleotides de novo biosynthesis II superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) pyrimidine deoxyribonucleotides de novo biosynthesis I | details |
| CFinderADM001222 | tryptophan synthase activity tryptophan metabolic process transferase activity, transferring acyl groups octanoyl-ACP biosynthesis (mitochondria, yeast) fatty acid biosynthesis initiation I biotin-carboxyl carrier protein assembly stearate biosynthesis II (bacteria and plants) fatty acid elongation -- saturated pyruvate decarboxylation to acetyl CoA tryptophan biosynthesis Fatty_acid_biosynthesis Benzoxazinoid_biosynthesis Fatty_acid_biosynthesis Pyruvate_metabolism Insulin_resistance Biotin_metabolism Phenylalanine,_tyrosine_and_tryptophan_biosynthesis | details |
| CFinderADM001333 | Transcription factor: EIL transferase activity, transferring acyl groups mitochondrial outer membrane Golgi vesicle transport fatty acid elongation -- saturated stearate biosynthesis II (bacteria and plants) pyruvate decarboxylation to acetyl CoA Pyruvate_metabolism Biotin_metabolism Flavonoid_biosynthesis Flavonoid_biosynthesis Flavonoid_biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |