CFinderADM000917 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| GPI-anchor transamidase complex | 0.006593205 | GO:0042765 |
| Golgi_transport_complex | 0.006593205 | GO:0017119 |
| Arp2/3_protein_complex | 0.009661687 | GO:0005885 |
| attachment_of_GPI_anchor_to_protein | 0.011486347 | GO:0016255 |
| actin_filament_organization | 0.011486347 | GO:0007015 |
| intracellular transport | 0.011486347 | GO:0046907 |
| Arp2/3_complex-mediated_actin_nucleation | 0.015782366 | GO:0034314 |
| ion transport | 0.030919569 | GO:0006811 |
| amino_acid_transmembrane_transport | 0.036206367 | GO:0003333 |
| Herpes_simplex_infection | 0.035823705 | KEGG |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM48 | 0.005370772 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g067590.2 | homolog of yeast sucrose nonfermenting 4 | AT1G09020 (1.00E-177) |
| Solyc02g070290.2 | cation-chloride co-transporter 1 | AT1G30450 (0) |
| Solyc03g052980.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | AT2G42520 (0) |
| Solyc04g024530.2 | Actin-like ATPase superfamily protein | AT1G13180 (0) |
| Solyc05g006950.2 | conserved oligomeric Golgi complex component-related / COG complex component-related | AT5G51430 (0) |
| Solyc05g050600.2 | dynamin-like protein | AT5G42080 (0) |
| Solyc08g006960.2 | Clathrin adaptor complexes medium subunit family protein | AT5G46630 (0) |
| Solyc08g080260.2 | Pleckstrin homology (PH) domain superfamily protein | AT4G11790 (7.00E-56) |
| Solyc09g059960.2 | GPI transamidase component Gpi16 subunit family protein | AT3G07140 (0) |
| Solyc12g049230.1 | Kinase-related protein of unknown function (DUF1296) | AT3G13990 (6.00E-119) |
| Solyc12g089140.1 | Erythronate-4-phosphate dehydrogenase family protein | AT1G75180 (1.00E-92) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000016 | transmembrane transport membrane integral to membrane pectate lyase activity cation transport solute:hydrogen antiporter activity protein phosphorylation protein kinase activity exocytosis phospholipid binding response to stress vesicle docking enzyme inhibitor activity PPC:5.2.1: Other Kinase Transcription factor: LIM nutrient reservoir activity cell wall transferase activity, transferring glycosyl groups cell wall modification pectinesterase activity Pentose_and_glucuronate_interconversions non-hydrolytic cleavage of glycosidic bonds, Polysaccharide Lyases: PL4 hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 | details |
| CFinderADM000542 | COPI vesicle coat intracellular protein transport E3 adaptor: DWD membrane coat structural molecule activity vesicle-mediated transport Ran_GTPase_binding protein binding Herpes_simplex_infection | details |
| CFinderADM000556 | cis-Golgi network intracellular protein transport hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 | details |
| CFinderADM000764 | metallopeptidase activity Ran_GTPase_binding phosphatidylcholine biosynthesis II phosphatidylcholine biosynthesis III phosphatidylcholine biosynthesis IV choline biosynthesis I Renin-angiotensin_system Glycerophospholipid_metabolism Herpes_simplex_infection | details |
| CFinderADM000816 | regulation of sequence-specific DNA binding transcription factor activity PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII E1: ThiF guanyl-nucleotide exchange factor activity small protein activating enzyme activity amino acid transmembrane transporter activity amino_acid_transmembrane_transport ion transport small GTPase mediated signal transduction transcription initiation, DNA-dependent Platinum_drug_resistance | details |
| CFinderADM000851 | four-way junction helicase activity vesicle docking involved in exocytosis DNA recombination vesicle-mediated transport Synaptic_vesicle_cycle Insulin_resistance | details |
| CFinderADM000961 | intracellular protein transport vesicle-mediated transport Herpes_simplex_infection | details |
| CFinderADM000962 | intracellular transport ABC_transporters | details |
| CFinderADM000972 | oligosaccharyl transferase activity protein glycosylation methyltransferase activity trehalose biosynthesis VI phosphatidylcholine biosynthesis IV phosphatidylcholine biosynthesis III choline biosynthesis I phosphatidylcholine biosynthesis II Glycerophospholipid_metabolism Protein_processing_in_endoplasmic_reticulum formation of glycosidic bonds, GlycosylTransferases: GTnc adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM48 formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001039 | regulation of lipid kinase activity PAS complex ER_membrane_protein_complex protein phosphatase type 2A complex protein phosphatase type 2A regulator activity phosphoric ester hydrolase activity 3-phosphoinositide biosynthesis | details |
| CFinderADM001047 | DUB: USP uridylyltransferase activity Ran_GTPase_binding sucrose biosynthesis II UDP-glucose biosynthesis stachyose degradation | details |
| CFinderADM001060 | retrograde transport, endosome to Golgi phosphopyruvate hydratase complex retromer complex phosphopyruvate hydratase activity protein transporter activity protein transport glycolysis magnesium ion binding gluconeogenesis I glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) HIF-1_signaling_pathway Alzheimer's_disease | details |
| CFinderADM001156 | DUB: JAMM protein ubiquitination Herpes_simplex_infection | details |
Expression profiles
 Show details about module gene expression profiling |