CFinderADM000921 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| small-subunit processome | 0.002071167 | GO:0032040 |
| Transcription factor: GeBP | 0.004141082 | gene family |
| Transcription factor: RWP-RK | 0.004141082 | gene family |
| protein folding | 0.023931168 | GO:0006457 |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g005290.2 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein | |
| Solyc04g049710.2 | tonneau 1b (TON1b) | AT3G55005 (2.00E-91) |
| Solyc05g005730.2 | AT5G48240 (5.00E-70) | |
| Solyc05g013740.2 | sphere organelles protein-related | AT1G13030 (7.00E-42) |
| Solyc07g042700.2 | RNA-binding (RRM/RBD/RNP motifs) family protein | AT5G58130 (5.00E-54) |
| Solyc07g042730.2 | RNA-binding (RRM/RBD/RNP motifs) family protein | |
| Solyc08g008040.2 | PIN domain-like family protein | |
| Solyc12g011190.1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000286 | Cdc73/Paf1 complex tetrahydrofolylpolyglutamate synthase activity histone modification folic acid-containing compound biosynthetic process Transcription factor: GeBP Transcription factor: faR1 tetrahydrofolate biosynthesis tetrahydrofolate biosynthesis II Folate_biosynthesis Cationic_antimicrobial_peptide_(CAMP)_resistance | details |
| CFinderADM000321 | small-subunit processome Transcription factor: bZIP Transcription regulator: C3H | details |
| CFinderADM000506 | uracil DNA N-glycosylase activity base-excision repair DNA repair Primary_immunodeficiency Herpes_simplex_infection | details |
| CFinderADM000507 | uracil DNA N-glycosylase activity Transcription regulator: HMG base-excision repair Primary_immunodeficiency Cationic_antimicrobial_peptide_(CAMP)_resistance | details |
| CFinderADM000545 | Transcription regulator: IWS1 Transcription factor: GeBP DUB: UCH Transcription factor: RWP-RK | details |
| CFinderADM000673 | regulation of mRNA splicing, via spliceosome nuclease activity Transcription regulator: C3H Transcription factor: B3 DNA repair Base_excision_repair | details |
| CFinderADM000749 | regulation of nitric-oxide synthase activity regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity protein_kinase_binding Transcription factor: NF-YC Transcription factor: RWP-RK | details |
| CFinderADM000920 | Transcription factor: RWP-RK | details |
| CFinderADM000925 | protein_peptidyl-prolyl_isomerization peptidyl-prolyl cis-trans isomerase activity protein folding mRNA_surveillance_pathway Cationic_antimicrobial_peptide_(CAMP)_resistance | details |
| CFinderADM001164 | regulation of mRNA splicing, via spliceosome chromosome organization histone modification chromosome Cdc73/Paf1 complex Transcription regulator: C3H | details |
| CFinderADM001166 | rRNA processing E3 adaptor: DWD small_nucleolar_ribonucleoprotein_complex Mpp10 complex small-subunit processome protein binding Herpes_simplex_infection | details |
| CFinderADM001237 | protein_peptidyl-prolyl_isomerization protein folding peptidyl-prolyl cis-trans isomerase activity mRNA_surveillance_pathway Cationic_antimicrobial_peptide_(CAMP)_resistance Herpes_simplex_infection | details |
Expression profiles
 Show details about module gene expression profiling |