CFinderADM001164 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| regulation of mRNA splicing, via spliceosome | 0.002878899 | GO:0048024 |
| chromosome organization | 0.003357507 | GO:0051276 |
| histone modification | 0.003357507 | GO:0016570 |
| chromosome | 0.005696119 | GO:0005694 |
| Cdc73/Paf1 complex | 0.005696119 | GO:0016593 |
| Transcription regulator: C3H | 0.010834567 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g081500.2 | like heterochromatin protein (LHP1) | AT5G17690 (2.00E-37) |
| Solyc03g112520.2 | FKBP12 interacting protein 37 | AT3G54170 (1.00E-99) |
| Solyc05g013740.2 | sphere organelles protein-related | AT1G13030 (7.00E-42) |
| Solyc06g063020.2 | SAP domain-containing protein | AT5G66840 (5.00E-34) |
| Solyc06g083870.2 | Structural maintenance of chromosomes (SMC) family protein | AT3G54670 (0) |
| Solyc07g041550.2 | binding | AT2G06210 (2.00E-131) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000198 | regulation of mRNA splicing, via spliceosome peroxisome organization integral_component_of_peroxisomal_membrane nuclease activity Base_excision_repair | details |
| CFinderADM000280 | regulation of mRNA splicing, via spliceosome peroxisome organization integral_component_of_peroxisomal_membrane nucleus nucleosome assembly nucleosome nuclease activity Transcription factor: MYB-RELATED Transcription factor: C2H2 Base_excision_repair | details |
| CFinderADM000286 | Cdc73/Paf1 complex tetrahydrofolylpolyglutamate synthase activity histone modification folic acid-containing compound biosynthetic process Transcription factor: GeBP Transcription factor: faR1 tetrahydrofolate biosynthesis tetrahydrofolate biosynthesis II Folate_biosynthesis Cationic_antimicrobial_peptide_(CAMP)_resistance | details |
| CFinderADM000321 | small-subunit processome Transcription factor: bZIP Transcription regulator: C3H | details |
| CFinderADM000506 | uracil DNA N-glycosylase activity base-excision repair DNA repair Primary_immunodeficiency Herpes_simplex_infection | details |
| CFinderADM000507 | uracil DNA N-glycosylase activity Transcription regulator: HMG base-excision repair Primary_immunodeficiency Cationic_antimicrobial_peptide_(CAMP)_resistance | details |
| CFinderADM000514 | mRNA_splice_site_selection U1_snRNP mRNA_binding | details |
| CFinderADM000673 | regulation of mRNA splicing, via spliceosome nuclease activity Transcription regulator: C3H Transcription factor: B3 DNA repair Base_excision_repair | details |
| CFinderADM000811 | regulation of mRNA splicing, via spliceosome translational initiation nuclease activity translation initiation factor activity DNA-directed RNA polymerase activity Base_excision_repair | details |
| CFinderADM000839 | chromosome organization Transcription regulator: HMG Transcription regulator: Jumonji chromosome | details |
| CFinderADM000873 | U1_snRNP Cdc73/Paf1 complex mRNA_splice_site_selection histone modification mRNA_binding nucleic acid binding Transcription factor: C2H2 | details |
| CFinderADM000901 | U1_snRNP Cdc73/Paf1 complex mRNA_splice_site_selection histone modification mRNA_binding Transcription factor: C2H2 | details |
| CFinderADM000921 | small-subunit processome Transcription factor: GeBP Transcription factor: RWP-RK protein folding | details |
| CFinderADM000925 | protein_peptidyl-prolyl_isomerization peptidyl-prolyl cis-trans isomerase activity protein folding mRNA_surveillance_pathway Cationic_antimicrobial_peptide_(CAMP)_resistance | details |
| CFinderADM001014 | regulation of mRNA splicing, via spliceosome | details |
| CFinderADM001166 | rRNA processing E3 adaptor: DWD small_nucleolar_ribonucleoprotein_complex Mpp10 complex small-subunit processome protein binding Herpes_simplex_infection | details |
| CFinderADM001237 | protein_peptidyl-prolyl_isomerization protein folding peptidyl-prolyl cis-trans isomerase activity mRNA_surveillance_pathway Cationic_antimicrobial_peptide_(CAMP)_resistance Herpes_simplex_infection | details |
Expression profiles
 Show details about module gene expression profiling |