CFinderADM001014 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| regulation of mRNA splicing, via spliceosome | 0.000345468 | GO:0048024 |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g081500.2 | like heterochromatin protein (LHP1) | AT5G17690 (2.00E-37) |
| Solyc02g093510.2 | Surfeit locus protein 2 (SURF2) | AT5G40570 (7.00E-39) |
| Solyc03g112520.2 | FKBP12 interacting protein 37 | AT3G54170 (1.00E-99) |
| Solyc06g084500.2 | AT4G03180 (2.00E-33) | |
| Solyc07g008330.2 | AT5G57120 (2.00E-29) | |
| Solyc08g067880.2 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000198 | regulation of mRNA splicing, via spliceosome peroxisome organization integral_component_of_peroxisomal_membrane nuclease activity Base_excision_repair | details |
| CFinderADM000280 | regulation of mRNA splicing, via spliceosome peroxisome organization integral_component_of_peroxisomal_membrane nucleus nucleosome assembly nucleosome nuclease activity Transcription factor: MYB-RELATED Transcription factor: C2H2 Base_excision_repair | details |
| CFinderADM000514 | mRNA_splice_site_selection U1_snRNP mRNA_binding | details |
| CFinderADM000515 | Epstein-Barr_virus_infection | details |
| CFinderADM000563 | Epstein-Barr_virus_infection | details |
| CFinderADM000673 | regulation of mRNA splicing, via spliceosome nuclease activity Transcription regulator: C3H Transcription factor: B3 DNA repair Base_excision_repair | details |
| CFinderADM000811 | regulation of mRNA splicing, via spliceosome translational initiation nuclease activity translation initiation factor activity DNA-directed RNA polymerase activity Base_excision_repair | details |
| CFinderADM001164 | regulation of mRNA splicing, via spliceosome chromosome organization histone modification chromosome Cdc73/Paf1 complex Transcription regulator: C3H | details |
Expression profiles
 Show details about module gene expression profiling |