CFinderADM000986 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| E3: UBR-box | 0.009592601 | gene family |
| DUB: USP | 0.029929919 | gene family |
| xylogalacturonan biosynthesis | 0.008262164 | plantCyc |
| Protein_digestion_and_absorption | 0.015856565 | KEGG |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.029929919 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g058730.2 | AT4G16180 (0) | |
| Solyc01g098170.2 | ARM repeat superfamily protein | AT3G05040 (0) |
| Solyc04g064680.2 | Exostosin family protein | AT1G21480 (0) |
| Solyc06g008730.2 | peroxin 6 | AT1G03000 (0) |
| Solyc07g063440.2 | CLUB | AT5G54440 (0) |
| Solyc10g084760.1 | proteolysis 6 | AT5G02310 (0) |
| Solyc11g068640.1 | ARM repeat superfamily protein | AT3G01780 (0) |
| Solyc11g071700.1 | ubiquitin-specific protease 12 | AT5G06600 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000704 | PPC:2.1.4: GmPK6/AtMRK1 Family myosin complex protein ubiquitination | details |
| CFinderADM000872 | structural molecule activity vesicle-mediated transport intracellular protein transport PPC:5.1.1: Other Kinase clathrin coat of trans-Golgi network vesicle clathrin coat of coated pit PPC:2.1.4: GmPK6/AtMRK1 Family membrane coat phosphatidylinositol metabolic process 3-phosphoinositide biosynthesis Regulation_of_actin_cytoskeleton | details |
| CFinderADM001063 | hydrolase activity Transcription regulator: Jumonji amino_acid_transmembrane_transport amino acid transmembrane transporter activity γ-glutamyl cycle Arginine_biosynthesis Glutathione_metabolism | details |
| CFinderADM001177 | membrane coat sialyltransferase activity structural molecule activity DUB: USP protein ubiquitination vesicle-mediated transport protein glycosylation intracellular protein transport Glycosphingolipid_biosynthesis_-_ganglio_series Protein_processing_in_endoplasmic_reticulum formation of glycosidic bonds, GlycosylTransferases: GTnc hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 | details |
| CFinderADM001298 | plant sterol biosynthesis Protein_processing_in_endoplasmic_reticulum Steroid_biosynthesis Alzheimer's_disease hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 | details |
Expression profiles
 Show details about module gene expression profiling |