CFinderADM001206 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| oxidoreductase activity, acting on the CH-NH2 group of donors | 0.005914434 | GO:0016638 |
| pyridoxamine-phosphate oxidase activity | 0.005914434 | GO:0004733 |
| Transcription regulator: TRAF | 0.009014312 | gene family |
| FMN binding | 0.011818656 | GO:0010181 |
| E3 adaptor: BTB | 0.018293496 | gene family |
| NADH repair | 0.0037996 | plantCyc |
| pyridoxal 5'-phosphate salvage I | 0.004747449 | plantCyc |
| pyridoxal 5'-phosphate salvage II (plants) | 0.005377732 | plantCyc |
| Vitamin_B6_metabolism | 0.003105632 | KEGG |
| hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 | 0.009014312 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc03g113780.2 | pyridoxin (pyrodoxamine) 5\'-phosphate oxidase | AT5G49970 (0) |
| Solyc05g052970.2 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | AT2G39750 (0) |
| Solyc06g073240.2 | Domain of unknown function (DUF303) | AT4G34215 (1.00E-80) |
| Solyc06g084250.2 | ARM repeat protein interacting with ABF2 | AT5G19330 (0) |
| Solyc07g064910.2 | EPS15 homology domain 1 | AT3G20290 (0) |
| Solyc09g090540.2 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000401 | phosphoenolpyruvate carboxylase activity malate_dehydrogenase_(decarboxylating)_(NAD+)_activity carbon fixation tricarboxylic acid cycle solute:hydrogen antiporter activity cation transport CO2 fixation into oxaloacetate (anapleurotic) glutamine biosynthesis III TCA cycle variation V (plant) gluconeogenesis I Methane_metabolism Carbon_fixation_in_photosynthetic_organisms | details |
| CFinderADM000517 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides E2: UBC Amino_sugar_and_nucleotide_sugar_metabolism | details |
| CFinderADM000608 | pyridoxamine-phosphate oxidase activity D-aminoacyl-tRNA_deacylase_activity oxidoreductase activity, acting on the CH-NH2 group of donors FMN binding pyridoxal 5'-phosphate salvage I adenine and adenosine salvage II NADH repair valine biosynthesis pyridoxal 5'-phosphate salvage II (plants) L-ascorbate biosynthesis I (L-galactose pathway) adenosine nucleotides degradation I Pantothenate_and_CoA_biosynthesis Vitamin_B6_metabolism Ascorbate_and_aldarate_metabolism | details |
| CFinderADM000820 | microtubule binding microtubule cytoskeleton organization cytoskeleton organization cytokinesis ionotropic glutamate receptor activity UTP and CTP dephosphorylation II pyrimidine deoxyribonucleotides de novo biosynthesis I | details |
| CFinderADM000937 | polysaccharide catabolic process Transcription factor: BES1 beta-amylase activity GTPase activator activity cytoplasm hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 | details |
| CFinderADM001140 | Ran_GTPase_binding intracellular protein transport | details |
| CFinderADM001250 | S-formylglutathione hydrolase activity formaldehyde_catabolic_process cellular metabolic process serine-type peptidase activity glycine betaine biosynthesis III (plants) formaldehyde oxidation II (glutathione-dependent) S-methyl-5-thio-α-D-ribose 1-phosphate degradation Cysteine_and_methionine_metabolism Methane_metabolism beta-Alanine_metabolism hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 | details |
Expression profiles
 Show details about module gene expression profiling |