CFinderADM001274 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| PPC:5.2.1: Other Kinase | 0.012826779 | gene family |
| GTP binding | 0.018736744 | GO:0005525 |
| sphingolipid biosynthesis (plants) | 0.006889299 | plantCyc |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g023970.2 | GTP binding | AT1G30580 (0) |
| Solyc04g051830.2 | GTP-binding protein-related | AT4G39520 (0) |
| Solyc05g007460.2 | sphingoid base hydroxylase 2 | AT1G14290 (9.00E-119) |
| Solyc06g007440.2 | SOS3-interacting protein 4 | AT2G30360 (3.00E-126) |
| Solyc07g065020.2 | protein phosphatase X 2 | AT5G55260 (4.00E-175) |
| Solyc09g082470.2 | Protein kinase superfamily protein | AT3G22750 (2.00E-159) |
| Solyc10g080780.1 | bZIP transcription factor family protein | AT5G06950 (1.00E-79) |
| Solyc11g033280.1 | eukaryotic initiation factor 4A-III | AT3G19760 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000016 | transmembrane transport membrane integral to membrane pectate lyase activity cation transport solute:hydrogen antiporter activity protein phosphorylation protein kinase activity exocytosis phospholipid binding response to stress vesicle docking enzyme inhibitor activity PPC:5.2.1: Other Kinase Transcription factor: LIM nutrient reservoir activity cell wall transferase activity, transferring glycosyl groups cell wall modification pectinesterase activity Pentose_and_glucuronate_interconversions non-hydrolytic cleavage of glycosidic bonds, Polysaccharide Lyases: PL4 hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 | details |
| CFinderADM000555 | lipoate biosynthetic process tRNA modification protein methylation E3 adaptor: DWD tRNA (guanine-N7-)-methyltransferase activity lipoate synthase activity 4 iron, 4 sulfur cluster binding lipoate biosynthesis and incorporation II lipoate biosynthesis and incorporation I Herpes_simplex_infection Lipoic_acid_metabolism | details |
| CFinderADM000889 | cytoplasm eukaryotic translation initiation factor 3 complex lipoate biosynthetic process ribosome biogenesis protein methylation lipoate biosynthesis and incorporation II lipoate biosynthesis and incorporation I valine degradation I Lipoic_acid_metabolism | details |
| CFinderADM000896 | Transcription factor: C2C2-LSD homoserine biosynthesis trehalose biosynthesis VI methylerythritol phosphate pathway II D-serine degradation methylerythritol phosphate pathway I lysine biosynthesis VI thiosulfate disproportionation III (rhodanese) trans, trans-farnesyl diphosphate biosynthesis serine racemization mevalonate pathway I formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001156 | DUB: JAMM protein ubiquitination Herpes_simplex_infection | details |
| CFinderADM001162 | tetrahydrofolate_biosynthetic_process GTP binding GTP_cyclohydrolase_I_activity 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I tetrahydrofolate biosynthesis II triacylglycerol degradation Retrograde_endocannabinoid_signaling Folate_biosynthesis | details |
| CFinderADM001173 | unfolded protein binding protein folding Transcription factor: C2C2-LSD mitochondrial outer membrane ATP binding GTP binding | details |
| CFinderADM001321 | PPC:5.2.1: Other Kinase proteasomal ubiquitin-dependent protein catabolic process protein domain specific binding damaged DNA binding nucleotide-excision repair fatty acid biosynthetic process sphingolipid biosynthesis (plants) Cell_cycle_-_yeast | details |
Expression profiles
 Show details about module gene expression profiling |