CFinderADM001308 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| malate_dehydrogenase_(decarboxylating)_(NAD+)_activity | 0.027065975 | GO:0004471 |
| Transcription regulator: AUX/IAA | 0.02963062 | gene family |
| xylogalacturonan biosynthesis | 0.024786492 | plantCyc |
| gluconeogenesis I | 0.025037294 | plantCyc |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.02963062 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g079270.2 | Inositol monophosphatase family protein | AT4G05090 (7.00E-126) |
| Solyc03g120390.2 | AUX/IAA transcriptional regulator family protein | AT1G04250 (9.00E-56) |
| Solyc07g005540.1 | Leucine-rich repeat protein kinase family protein | AT2G24230 (0) |
| Solyc07g006170.2 | Exostosin family protein | AT4G16745 (1.00E-57) |
| Solyc07g063340.2 | Protein of unknown function (DUF1218) | AT1G52910 (3.00E-57) |
| Solyc10g008490.2 | Protein phosphatase 2C family protein | AT1G03590 (9.00E-179) |
| Solyc10g074790.1 | Auxin efflux carrier family protein | AT5G01990 (8.00E-157) |
| Solyc12g044600.2 | NADP-malic enzyme 4 | AT1G79750 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000316 | D-alanine-D-alanine ligase activity cytoplasm Cytochrome P450: CYP80M eukaryotic translation initiation factor 3 complex magnoflorine biosynthesis ternatin C3 biosynthesis Vancomycin_resistance Other_glycan_degradation | details |
| CFinderADM000861 | malate_dehydrogenase_(decarboxylating)_(NAD+)_activity calmodulin binding sequence-specific DNA binding transcription factor activity Transcription factor: LOB Transcription factor: MIKC gluconeogenesis I Carbon_fixation_in_photosynthetic_organisms | details |
| CFinderADM000943 | phosphatidylinositol phosphorylation signal transducer activity two-component signal transduction system (phosphorelay) biotin biosynthesis from 8-amino-7-oxononanoate I alanine biosynthesis III molybdenum cofactor biosynthesis Sulfur_relay_system Biotin_metabolism Phosphatidylinositol_signaling_system | details |
| CFinderADM001128 | calcium-dependent phospholipid binding calcium ion binding xylogalacturonan biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001245 | vacuolar proton-transporting V-type ATPase, V1 domain negative regulation of transcription from RNA polymerase III promoter carboxyl- or carbamoyltransferase activity cellular amino acid metabolic process phosphatidylinositol phosphorylation hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances proton-transporting ATPase activity, rotational mechanism amino acid binding ATP hydrolysis coupled proton transport citrulline degradation arginine biosynthesis I (via L-ornithine) unsaturated, even numbered fatty acid β-oxidation arginine biosynthesis II (acetyl cycle) ornithine-citrulline shuttle fatty acid β-oxidation II (peroxisome) methyl ketone biosynthesis PPAR_signaling_pathway Arginine_biosynthesis Phosphatidylinositol_signaling_system adenosine ribonucleotides de novo biosynthesis | details |
| CFinderADM001306 | Platinum_drug_resistance Cationic_antimicrobial_peptide_(CAMP)_resistance | details |
Expression profiles
 Show details about module gene expression profiling |