TissueCFM000109 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| response to hormone stimulus | 0.018187815 | GO:0009725 |
| Protein_kinases_phosphatases, PPC:4.1.5.1: WNK like kinase - with no lysine kinase | 0.003166561 | gene family |
| Transcription_related, Transcription regulator: ARF | 0.009093907 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g080200.2 | REF4-related 1 | AT3G23590 (0) |
| Solyc01g111890.2 | F-box/RNI-like superfamily protein | AT2G17020 (0) |
| Solyc03g112140.2 | with no lysine (K) kinase 3 | AT3G48260 (5.00E-167) |
| Solyc05g009670.2 | Plasma-membrane choline transporter family protein | AT1G25500 (8.00E-176) |
| Solyc09g007810.2 | auxin response factor 16 | AT4G30080 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000419 | Transcription_related, Transcription factor: GRAS trans-cinnamoyl-CoA biosynthesis umbelliferone biosynthesis 4-hydroxybenzoate biosynthesis I (eukaryotes) simplecoumarins biosynthesis Flavonoid biosynthesis Phenylpropanoid biosynthesis | details |
| TissueCFM000731 | mRNA processing Transcription_related, Transcription factor: faR1 | details |
| TissueCFM000901 | Protein_kinases_phosphatases, PPC:2.1.4: GmPK6/AtMRK1 Family Cell cycle - yeast | details |
| TissueCFM000905 | protein phosphorylation protein kinase activity Protein_kinases_phosphatases, PPC:4.1.5.1: WNK like kinase - with no lysine kinase formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:5.2.1: Other Kinase 2,3-cis-flavanols biosynthesis proanthocyanidin biosynthesis from flavanols Pyrimidine metabolism Flavonoid biosynthesis Glycosphingolipid biosynthesis - lacto and neolacto series Platinum drug resistance | details |
| TissueCFM001019 | protein phosphorylation protein kinase activity ion transport Protein_kinases_phosphatases, PPC:4.1.5.1: WNK like kinase - with no lysine kinase Protein_kinases_phosphatases, PPC:5.2.1: Other Kinase formation of glycosidic bonds, GlycosylTransferases: GTnc phosphate acquisition Platinum drug resistance Glycosphingolipid biosynthesis - lacto and neolacto series Tuberculosis | details |
Expression profiles
 Show details about module gene expression profiling |