TissueCFM000450 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| DNA replication | 0.01981499 | GO:0006260 |
| single-stranded DNA binding | 0.02627389 | GO:0003697 |
| Transcription_related, Transcription regulator: ARID | 0.002157652 | gene family |
| valine degradation I | 0.004311577 | plantCyc |
| beta-Alanine metabolism | 0.021103626 | KEGG |
| Herpes simplex infection | 0.024670514 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc10g078400.1 | AT2G41150 (6.00E-156) | |
| Solyc10g085630.1 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein | AT4G31810 (1.00E-163) |
| Solyc11g033280.1 | eukaryotic initiation factor 4A-III | AT3G19760 (0) |
| Solyc12g016190.1 | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain | AT3G13350 (3.00E-78) |
| Solyc12g038370.1 | Nucleic acid-binding, OB-fold-like protein | AT3G18580 (1.00E-68) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000609 | protein insertion into membrane Ubiquitin_Proteasome_system, E3 adaptor: DWD triacylglycerol degradation Retrograde endocannabinoid signaling Herpes simplex infection | details |
| TissueCFM000622 | L-phenylalanine biosynthetic process protein N-linked glycosylation prephenate dehydratase activity beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc phenylalanine biosynthesis II phenylalanine biosynthesis (cytosolic, plants) | details |
Expression profiles
 Show details about module gene expression profiling |