TissueCFM000545 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| 7S RNA binding | 0.011392237 | GO:0008312 |
| nucleosome assembly | 0.014694864 | GO:0006334 |
| SRP-dependent cotranslational protein targeting to membrane | 0.014694864 | GO:0006614 |
| signal recognition particle | 0.017260966 | GO:0048500 |
| Ubiquitin_Proteasome_system, E3 adaptor: DWD | 0.036740494 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc04g015050.2 | Transport protein particle (TRAPP) component | AT5G58030 (7.00E-104) |
| Solyc06g069890.2 | NAP1-related protein 2 | AT1G18800 (2.00E-86) |
| Solyc07g007380.2 | AT5G35080 (6.00E-88) | |
| Solyc07g066060.2 | Transducin/WD40 repeat-like superfamily protein | AT5G56130 (1.00E-166) |
| Solyc08g075850.2 | KOW domain-containing protein | AT5G23535 (5.00E-73) |
| Solyc08g082740.2 | signal recognition particle 19 kDa protein, putative / SRP19, putative | AT1G48160 (3.00E-42) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000512 | 7S RNA binding signal recognition particle SRP-dependent cotranslational protein targeting to membrane Transcription_related, Transcription factor: faR1 | details |
| TissueCFM000884 | signal recognition particle SRP-dependent cotranslational protein targeting to membrane translational initiation rRNA binding 7S RNA binding translation initiation factor activity peptidyl-prolyl cis-trans isomerase activity Cationic antimicrobial peptide (CAMP) resistance | details |
Expression profiles
 Show details about module gene expression profiling |