TissueCFM000699 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| nuclear pore | 0.002933308 | GO:0005643 |
| RNA processing | 0.036610075 | GO:0006396 |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g090850.2 | putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain | |
| Solyc01g103680.2 | Protein of unknown function (DUF1682) | AT4G24330 (1.00E-145) |
| Solyc03g118800.2 | RNA-binding (RRM/RBD/RNP motifs) family protein | AT2G18510 (8.00E-121) |
| Solyc04g007280.2 | Nucleoporin autopeptidase | AT1G10390 (0) |
| Solyc06g071140.2 | proline-rich family protein | AT5G62640 (6.00E-39) |
| Solyc09g009680.2 | TBP-associated factor 12 | AT3G10070 (3.00E-65) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001314 | DNA-directed RNA polymerase II, core complex transcription from RNA polymerase II promoter LIM domain binding transcription cofactor activity transcription, DNA-dependent DNA binding DNA-directed RNA polymerase activity Herpes simplex infection | details |
Expression profiles
 Show details about module gene expression profiling |