TissueCFM001103 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| exosome_(RNase_complex) | 0.000805918 | GO:0000178 |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g090090.2 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT4G37210 (1.00E-71) |
| Solyc04g045630.2 | SCP1-like small phosphatase 5 | AT5G11860 (3.00E-97) |
| Solyc04g082320.2 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT1G76280 (0) |
| Solyc06g060150.2 | replication factor C subunit 3 | AT1G77470 (5.00E-157) |
| Solyc07g064570.2 | AT3G20490 (8.00E-62) | |
| Solyc09g074090.2 | ribosomal RNA processing 4 | AT1G03360 (5.00E-123) |
| Solyc11g069000.1 | TCP-1/cpn60 chaperonin family protein | AT5G20890 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000411 | kinetochore kinetochore_assembly centromeric DNA binding Ubiquitin_Proteasome_system, E3 adaptor: DWD EGFR tyrosine kinase inhibitor resistance | details |
| TissueCFM000730 | ATP-dependent_5'-3'_DNA_helicase_activity peptidyl-prolyl cis-trans isomerase activity DNA helicase activity protein_peptidyl-prolyl_isomerization RNA processing protein folding | details |
| TissueCFM000740 | centromeric DNA binding kinetochore_assembly kinetochore Smc5-Smc6_complex nucleic acid binding Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| TissueCFM001020 | exosome_(RNase_complex) nuclear mRNA splicing, via spliceosome RNA processing Transcription_related, Transcription regulator: SWI/SNF-BAF60b Hippo signaling pathway -fly | details |
| TissueCFM001230 | exosome_(RNase_complex) tRNA binding RNA binding ATP binding tRNA charging Aminoacyl-tRNA biosynthesis | details |
| TissueCFM001231 | exosome_(RNase_complex) tRNA binding Ubiquitin_Proteasome_system, E3 adaptor: DWD tRNA charging Aminoacyl-tRNA biosynthesis | details |
| TissueCFM001381 | tRNA binding Ubiquitin_Proteasome_system, E3 adaptor: DWD tRNA charging Aminoacyl-tRNA biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |