TreatCFM000280 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| nuclease activity | 0.007335171 | GO:0004518 |
| DNA repair | 0.020701739 | GO:0006281 |
| Ubiquitin_Proteasome_system, E3 adaptor: F-box | 0.038411117 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g056990.2 | AT5G06590 (3.00E-47) | |
| Solyc02g033040.2 | F-box and associated interaction domains-containing protein | AT3G23880 (3.00E-28) |
| Solyc03g025900.2 | single-stranded DNA endonuclease family protein | AT3G48900 (8.00E-165) |
| Solyc08g081710.2 | AT1G64080 (4.00E-46) | |
| Solyc09g009440.1 | Iron-sulphur cluster biosynthesis family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000281 | DNA replication nucleus origin recognition complex Cationic antimicrobial peptide (CAMP) resistance Retinol metabolism MicroRNAs in cancer Viral carcinogenesis | details |
| TreatCFM000355 | Transcription_related, Transcription factor: OFP hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM000590 | microtubule associated complex microtubule-based process Transcription_related, Transcription factor: C2H2 | details |
| TreatCFM000713 | copper ion binding O-methyltransferase activity polysaccharide_binding chlorogenic acid biosynthesis I scopoletin biosynthesis suberin monomers biosynthesis phospholipid remodeling (phosphatidylcholine, yeast) phosphatidylcholine acyl editing phospholipases phenylpropanoids methylation (ice plant) Flavonoid biosynthesis Phenylpropanoid biosynthesis | details |
| TreatCFM000953 | cytokinesis microtubule cytoskeleton organization microtubule binding Mineral absorption | details |
| TreatCFM001031 | hydrolase activity, hydrolyzing O-glycosyl compounds formation of glycosidic bonds, GlycosylTransferases: GTnc Quorum sensing Longevity regulating pathway - worm hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM001464 | transporter activity Drug metabolism - other enzymes | details |
Expression profiles
 Show details about module gene expression profiling |