TreatCFM000590 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| microtubule associated complex | 0.001726345 | GO:0005875 |
| microtubule-based process | 0.004999559 | GO:0007017 |
| Transcription_related, Transcription factor: C2H2 | 0.02072259 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc03g113540.2 | Dynein light chain type 1 family protein | |
| Solyc04g081450.2 | cytomatrix protein-related | AT1G19980 (8.00E-52) |
| Solyc06g060740.1 | C2H2-like zinc finger protein | AT3G60580 (1.00E-26) |
| Solyc07g017540.2 | RAS associated with diabetes protein 51 | AT5G20850 (0) |
| Solyc09g009440.1 | Iron-sulphur cluster biosynthesis family protein | |
| Solyc10g080090.1 | BED zinc finger ;hAT family dimerisation domain | AT3G42170 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000280 | nuclease activity DNA repair Ubiquitin_Proteasome_system, E3 adaptor: F-box | details |
| TreatCFM000355 | Transcription_related, Transcription factor: OFP hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM000400 | mitochondrial outer membrane formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: trihelix RNA degradation Notch signaling pathway | details |
| TreatCFM000599 | mitochondrial outer membrane lipid binding DNA binding Transcription_related, Transcription regulator: HB diacylglycerol biosynthesis (PUFA enrichment in oilseed) Longevity regulating pathway - worm | details |
| TreatCFM000713 | copper ion binding O-methyltransferase activity polysaccharide_binding chlorogenic acid biosynthesis I scopoletin biosynthesis suberin monomers biosynthesis phospholipid remodeling (phosphatidylcholine, yeast) phosphatidylcholine acyl editing phospholipases phenylpropanoids methylation (ice plant) Flavonoid biosynthesis Phenylpropanoid biosynthesis | details |
| TreatCFM000953 | cytokinesis microtubule cytoskeleton organization microtubule binding Mineral absorption | details |
| TreatCFM001031 | hydrolase activity, hydrolyzing O-glycosyl compounds formation of glycosidic bonds, GlycosylTransferases: GTnc Quorum sensing Longevity regulating pathway - worm hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM001464 | transporter activity Drug metabolism - other enzymes | details |
Expression profiles
 Show details about module gene expression profiling |