TreatCFM000316 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| integral_component_of_endoplasmic_reticulum_membrane | 0.000949695 | GO:0030176 |
| macromolecule biosynthetic process | 0.007914124 | GO:0009059 |
| ADP_binding | 0.035984314 | GO:0043531 |
| calmodulin binding | 0.044815906 | GO:0005516 |
| polygalacturonase activity | 0.044815906 | GO:0004650 |
| Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family | 0.018455661 | gene family |
| Transcription_related, Transcription factor: GRAS | 0.048869476 | gene family |
| dolichyl-diphosphooligosaccharide biosynthesis | 0.02083624 | plantCyc |
| homogalacturonan degradation | 0.035246749 | plantCyc |
| hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | 0.048869476 | gene famuly |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g095590.2 | Protein of unknown function (DUF3133) | AT2G46380 (2.00E-88) |
| Solyc01g098160.2 | Protein kinase superfamily protein | AT1G54610 (0) |
| Solyc03g119140.2 | protein tyrosine kinase family protein | AT1G73660 (4.00E-152) |
| Solyc04g017750.2 | calmodulin binding | AT5G04020 (2.00E-30) |
| Solyc05g012910.2 | NB-ARC domain-containing disease resistance protein | AT1G50180 (3.00E-59) |
| Solyc06g066400.2 | dolichol phosphate-mannose biosynthesis regulatory protein-related | AT1G74340 (1.00E-27) |
| Solyc08g007970.2 | Myosin heavy chain-related protein | AT1G63300 (0) |
| Solyc08g060970.2 | Pectin lyase-like superfamily protein | AT5G27530 (1.00E-88) |
| Solyc08g082040.2 | Protein of unknown function (DUF3133) | AT3G61670 (9.00E-93) |
| Solyc09g010920.1 | GRAS family transcription factor | AT2G37650 (0) |
| Solyc11g011080.1 | disease resistance protein (TIR-NBS-LRR class), putative | AT5G17680 (5.00E-140) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000369 | integral_component_of_endoplasmic_reticulum_membrane macromolecule biosynthetic process Cytochrome_P450, Cytochrome P450: CYP98A Transcription_related, Transcription factor: zf-HD dolichyl-diphosphooligosaccharide biosynthesis scopoletin biosynthesis umbelliferone biosynthesis N-Glycan biosynthesis | details |
| TreatCFM000406 | integral_component_of_endoplasmic_reticulum_membrane macromolecule biosynthetic process Transcription_related, Transcription factor: zf-HD dolichyl-diphosphooligosaccharide biosynthesis N-Glycan biosynthesis | details |
| TreatCFM001168 | integral_component_of_endoplasmic_reticulum_membrane spindle pole cytoskeleton microtubule organizing center macromolecule biosynthetic process microtubule_nucleation | details |
| TreatCFM001172 | integral_component_of_endoplasmic_reticulum_membrane Sec61 translocon complex core TFIIH complex macromolecule biosynthetic process nucleotide-excision repair Protein_kinases_phosphatases, PPC:1.14.1: Crinkly 4 Like Kinase dolichyl-diphosphooligosaccharide biosynthesis N-Glycan biosynthesis | details |
| TreatCFM001276 | integral_component_of_endoplasmic_reticulum_membrane macromolecule biosynthetic process kinesin complex chromatin binding microtubule-based movement dolichyl-diphosphooligosaccharide biosynthesis N-Glycan biosynthesis MicroRNAs in cancer | details |
| TreatCFM001532 | integral_component_of_endoplasmic_reticulum_membrane microtubule organizing center cytoskeleton spindle pole microtubule_nucleation macromolecule biosynthetic process microtubule cytoskeleton organization amino_acid_transmembrane_transport amino acid transmembrane transporter activity formation of glycosidic bonds, GlycosylTransferases: GTnc dolichyl-diphosphooligosaccharide biosynthesis cellulose biosynthesis N-Glycan biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |