TreatCFM001532 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| integral_component_of_endoplasmic_reticulum_membrane | 0.00328575 | GO:0030176 |
| microtubule organizing center | 0.00328575 | GO:0005815 |
| cytoskeleton | 0.00328575 | GO:0005856 |
| spindle pole | 0.00328575 | GO:0000922 |
| microtubule_nucleation | 0.003918845 | GO:0007020 |
| macromolecule biosynthetic process | 0.003918845 | GO:0009059 |
| microtubule cytoskeleton organization | 0.015661845 | GO:0000226 |
| amino_acid_transmembrane_transport | 0.024769377 | GO:0003333 |
| amino acid transmembrane transporter activity | 0.027557295 | GO:0015171 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.020244585 | gene family |
| dolichyl-diphosphooligosaccharide biosynthesis | 0.007327993 | plantCyc |
| cellulose biosynthesis | 0.007327993 | plantCyc |
| N-Glycan biosynthesis | 0.011867084 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc04g051510.1 | Leucine-rich receptor-like protein kinase family protein | AT4G39400 (0) |
| Solyc05g008760.2 | bidirectional amino acid transporter 1 | AT2G01170 (3.00E-115) |
| Solyc06g066400.2 | dolichol phosphate-mannose biosynthesis regulatory protein-related | AT1G74340 (1.00E-27) |
| Solyc09g009140.2 | spindle pole body component 98 | AT5G06680 (0) |
| Solyc12g056580.1 | cellulose synthase A9 | AT2G21770 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000316 | integral_component_of_endoplasmic_reticulum_membrane macromolecule biosynthetic process ADP_binding calmodulin binding polygalacturonase activity Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family Transcription_related, Transcription factor: GRAS dolichyl-diphosphooligosaccharide biosynthesis homogalacturonan degradation hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM000369 | integral_component_of_endoplasmic_reticulum_membrane macromolecule biosynthetic process Cytochrome_P450, Cytochrome P450: CYP98A Transcription_related, Transcription factor: zf-HD dolichyl-diphosphooligosaccharide biosynthesis scopoletin biosynthesis umbelliferone biosynthesis N-Glycan biosynthesis | details |
| TreatCFM000406 | integral_component_of_endoplasmic_reticulum_membrane macromolecule biosynthetic process Transcription_related, Transcription factor: zf-HD dolichyl-diphosphooligosaccharide biosynthesis N-Glycan biosynthesis | details |
| TreatCFM000529 | formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: C2C2-Dof 4-hydroxybenzoate biosynthesis I (eukaryotes) wax esters biosynthesis I cellulose biosynthesis umbelliferone biosynthesis simplecoumarins biosynthesis suberin monomers biosynthesis Phenylpropanoid biosynthesis Flavonoid biosynthesis Phenylpropanoid biosynthesis Vitamin digestion and absorption | details |
| TreatCFM001119 | cytoskeleton spindle pole microtubule organizing center microtubule_nucleation microtubule cytoskeleton organization protein phosphorylation protein kinase activity Protein_kinases_phosphatases, PPC:4.1.5.1: WNK like kinase - with no lysine kinase Cell cycle - yeast | details |
| TreatCFM001168 | integral_component_of_endoplasmic_reticulum_membrane spindle pole cytoskeleton microtubule organizing center macromolecule biosynthetic process microtubule_nucleation | details |
| TreatCFM001172 | integral_component_of_endoplasmic_reticulum_membrane Sec61 translocon complex core TFIIH complex macromolecule biosynthetic process nucleotide-excision repair Protein_kinases_phosphatases, PPC:1.14.1: Crinkly 4 Like Kinase dolichyl-diphosphooligosaccharide biosynthesis N-Glycan biosynthesis | details |
| TreatCFM001276 | integral_component_of_endoplasmic_reticulum_membrane macromolecule biosynthetic process kinesin complex chromatin binding microtubule-based movement dolichyl-diphosphooligosaccharide biosynthesis N-Glycan biosynthesis MicroRNAs in cancer | details |
Expression profiles
 Show details about module gene expression profiling |