TreatCFM000494 module
|
Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| photosynthesis,_light_harvesting | 0.005859443 | GO:0009765 |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g014140.2 | ||
| Solyc04g045580.2 | AT1G27385 (2.00E-41) | |
| Solyc04g080870.1 | ATP-dependent protease La (LON) domain protein | AT1G75460 (1.00E-39) |
| Solyc08g067320.1 | light-harvesting chlorophyll-protein complex II subunit B1 | AT2G34430 (1.00E-40) |
| Solyc11g012940.1 | Thioredoxin superfamily protein | AT4G08280 (2.00E-36) |
| Solyc11g068810.1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000136 | photosynthesis,_light_harvesting aminoacyl-tRNA hydrolase activity copper ion transmembrane transporter activity copper_ion_transmembrane_transport Transcription_related, Transcription factor: C2C2-YABBY adhesion to carbohydrates, Glycoside Hydrolases:CBM18;hydrolysis and/or rearrangement of glycosidic bonds, Carbohydrate-Binding Modules:GH19 adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM48 | details |
| TreatCFM000409 | fatty acid α-oxidation I benzoate biosynthesis III (CoA-dependent, non-β-oxidative) Chloroalkane and chloroalkene degradation | details |
| TreatCFM000741 | protein metabolic process phosphogluconate dehydrogenase (decarboxylating) activity NAD binding oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor rosmarinic acid biosynthesis I rosmarinic acid biosynthesis II 4-hydroxybenzoate biosynthesis I (eukaryotes) Tropane, piperidine and pyridine alkaloid biosynthesis | details |
| TreatCFM000772 | details | |
| TreatCFM000851 | protein folding Cationic antimicrobial peptide (CAMP) resistance | details |
| TreatCFM000875 | details |
Expression profiles
 Show details about module gene expression profiling |