TreatCFM000625 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| D-aminoacyl-tRNA_deacylase_activity | 0.003808509 | GO:0051499 |
| peptide deformylase activity | 0.003808509 | GO:0042586 |
| Transcription_related, Transcription factor: ERF | 0.024282362 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g086680.2 | peptide deformylase 1B | AT5G14660 (8.00E-90) |
| Solyc03g112640.2 | Sec14p-like phosphatidylinositol transfer family protein | AT5G63060 (7.00E-95) |
| Solyc06g069390.2 | D-aminoacyl-tRNA deacylases | AT2G03800 (6.00E-117) |
| Solyc10g006140.2 | Acid phosphatase/vanadium-dependent haloperoxidase-related protein | AT3G21610 (2.00E-63) |
| Solyc12g005960.1 | ethylene responsive element binding factor 4 | |
| Solyc12g010790.1 | RAB GTPase homolog A1F | AT5G60860 (3.00E-115) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000070 | 4-alpha-glucanotransferase activity ternatin C3 biosynthesis starch degradation II Retrograde endocannabinoid signaling hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM000162 | cation transmembrane transporter activity cation transport Transcription_related, Transcription factor: ERF Viral carcinogenesis | details |
| TreatCFM000379 | Fanconi_anaemia_nuclear_complex small protein activating enzyme activity #N/A Ubiquitin_Proteasome_system, E1: ThiF Transcription_related, Transcription factor: ERF molybdenum cofactor biosynthesis Sulfur relay system | details |
| TreatCFM000908 | details | |
| TreatCFM000984 | Transcription_related, Transcription factor: ERF | details |
| TreatCFM001035 | signal transduction hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM001229 | phosphatidylinositol-3-phosphate_biosynthetic_process vacuole_organization phosphoric ester hydrolase activity regulation of transcription, DNA-dependent transcription, DNA-dependent Transcription_related, Transcription factor: faR1 Transcription_related, Transcription regulator: HB 3-phosphoinositide biosynthesis | details |
| TreatCFM001338 | heat shock protein binding unfolded protein binding Transcription_related, Transcription factor: ERF | details |
| TreatCFM001418 | thiamine biosynthetic process thiamine-phosphate diphosphorylase activity metal ion transport Transcription_related, Transcription factor: ERF hydroxymethylpyrimidine salvage 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis thiamin salvage IV (yeast) thiamin diphosphate biosynthesis IV (eukaryotes) 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) biotin biosynthesis from 8-amino-7-oxononanoate I thiamin salvage II thiamin formation from pyrithiamine and oxythiamine (yeast) Thiamine metabolism Biotin metabolism | details |
| TreatCFM001432 | mismatch repair complex regulation of transcription, DNA-dependent mismatched DNA binding galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity chromatin binding mitochondrion double-stranded DNA binding formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: mTERF Transcription_related, Transcription regulator: PHD xylan biosynthesis Mismatch repair Amino sugar and nucleotide sugar metabolism | details |
| TreatCFM001577 | Ubiquitin_Proteasome_system, E3: UBR-box | details |
| TreatCFM001636 | formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
Expression profiles
 Show details about module gene expression profiling |