TreatCFM001229 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| phosphatidylinositol-3-phosphate_biosynthetic_process | 0.002998465 | GO:0036092 |
| vacuole_organization | 0.002998465 | GO:0007033 |
| phosphoric ester hydrolase activity | 0.013447813 | GO:0042578 |
| regulation of transcription, DNA-dependent | 0.017457678 | GO:0006355 |
| transcription, DNA-dependent | 0.04430817 | GO:0006351 |
| Transcription_related, Transcription factor: faR1 | 0.012504294 | gene family |
| Transcription_related, Transcription regulator: HB | 0.022751567 | gene family |
| 3-phosphoinositide biosynthesis | 0.008036236 | plantCyc |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc03g007390.2 | Pentatricopeptide repeat (PPR) superfamily protein | AT5G40400 (7.00E-169) |
| Solyc03g123520.2 | Phosphoinositide phosphatase family protein | AT3G14205 (0) |
| Solyc07g043260.2 | FAR1-related sequence 2 | AT2G32250 (1.00E-165) |
| Solyc07g053610.2 | Homeodomain-like transcriptional regulator | AT5G44180 (0) |
| Solyc10g006140.2 | Acid phosphatase/vanadium-dependent haloperoxidase-related protein | AT3G21610 (2.00E-63) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000070 | 4-alpha-glucanotransferase activity ternatin C3 biosynthesis starch degradation II Retrograde endocannabinoid signaling hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM000162 | cation transmembrane transporter activity cation transport Transcription_related, Transcription factor: ERF Viral carcinogenesis | details |
| TreatCFM000379 | Fanconi_anaemia_nuclear_complex small protein activating enzyme activity #N/A Ubiquitin_Proteasome_system, E1: ThiF Transcription_related, Transcription factor: ERF molybdenum cofactor biosynthesis Sulfur relay system | details |
| TreatCFM000625 | D-aminoacyl-tRNA_deacylase_activity peptide deformylase activity Transcription_related, Transcription factor: ERF | details |
| TreatCFM001577 | Ubiquitin_Proteasome_system, E3: UBR-box | details |
| TreatCFM001636 | formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
Expression profiles
 Show details about module gene expression profiling |