TreatCFM000759 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| Transcription_related, Transcription factor: NF-YA | 0.013920039 | gene family |
| Transcription_related, Transcription factor: C2C2-Dof | 0.021462999 | gene family |
| Ubiquitin_Proteasome_system, E3: U-box | 0.026852714 | gene family |
| Ascorbate and aldarate metabolism | 0.012370801 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g090310.1 | Dof-type zinc finger DNA-binding family protein | AT1G51700 (2.00E-27) |
| Solyc03g005980.2 | NOD26-like intrinsic protein 1;2 | AT4G18910 (5.00E-104) |
| Solyc03g026200.2 | Protein of unknown function (DUF2930) | AT5G52110 (2.00E-85) |
| Solyc03g082640.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | AT2G46620 (3.00E-148) |
| Solyc03g083900.2 | SKU5 similar 2 | AT4G25240 (0) |
| Solyc03g121940.2 | nuclear factor Y, subunit A3 | AT1G72830 (2.00E-34) |
| Solyc08g079470.2 | Glycine cleavage T-protein family | AT4G12130 (7.00E-133) |
| Solyc11g005700.1 | CYS, MET, PRO, and GLY protein 2 | AT5G64660 (3.00E-98) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000161 | Ku70:Ku80_complex double-strand break repair via nonhomologous end joining telomeric_DNA_binding protein kinase C-activating G-protein coupled receptor signaling pathway diacylglycerol kinase activity damaged DNA binding ATP-dependent DNA helicase activity intracellular_signal_transduction kinase activity telomere maintenance Transcription_related, Transcription factor: C2H2 phosphatidate metabolism, as a signaling molecule Choline metabolism in cancer Viral carcinogenesis | details |
| TreatCFM000243 | CO2 fixation into oxaloacetate (anapleurotic) glutamine biosynthesis III | details |
| TreatCFM000309 | endoplasmic reticulum integral to membrane protein disulfide oxidoreductase activity phosphatidylinositol phosphorylation glycerol ether metabolic process Transcription_related, Transcription factor: LOB Phosphatidylinositol signaling system Ascorbate and aldarate metabolism | details |
| TreatCFM000320 | phosphatidylinositol phosphorylation Phosphatidylinositol signaling system | details |
| TreatCFM000435 | carotenoid biosynthetic process neoxanthin biosynthesis abscisic acid biosynthesis Carotenoid biosynthesis | details |
| TreatCFM000488 | transmembrane transport drug transmembrane transport drug transmembrane transporter activity antiporter activity | details |
| TreatCFM000504 | heterotrimeric G-protein complex G-protein coupled receptor signaling pathway signal transducer activity Transcription_related, Transcription factor: MYB Monoterpenoid biosynthesis | details |
| TreatCFM000556 | carotenoid biosynthetic process neoxanthin biosynthesis abscisic acid biosynthesis Carotenoid biosynthesis | details |
| TreatCFM001106 | Transcription_related, Transcription factor: bZIP L-ascorbate biosynthesis I (L-galactose pathway) GDP-mannose biosynthesis Biofilm formation - Pseudomonas aeruginosa | details |
| TreatCFM001156 | phosphate-containing compound metabolic process inorganic diphosphatase activity cytoplasm Ubiquitin_Proteasome_system, E2: UBC Oxidative phosphorylation | details |
| TreatCFM001175 | amine metabolic process primary amine oxidase activity quinone binding Transcription_related, Transcription regulator: SWI/SNF-BAF60b Tropane, piperidine and pyridine alkaloid biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |