TreatCFM000813 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| microtubule | 0.005515564 | GO:0005874 |
| microtubule-based process | 0.014998677 | GO:0007017 |
| GTPase activity | 0.027878366 | GO:0003924 |
| methyltransferase activity | 0.038453439 | GO:0008168 |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g088000.2 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | AT3G60910 (2.00E-105) |
| Solyc02g070860.2 | AT3G59090 (4.00E-79) | |
| Solyc04g072050.2 | AT1G22750 (3.00E-57) | |
| Solyc08g006890.2 | Tubulin/FtsZ family protein | AT4G14960 (0) |
| Solyc08g007760.2 | YTH family protein | AT4G11970 (3.00E-70) |
| Solyc10g085160.1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | AT5G01470 (1.00E-88) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000081 | microtubule microtubule-based process GTPase activity | details |
| TreatCFM000114 | oxidoreductase activity, acting on the CH-CH group of donors ubiquitin-protein ligase activity coenzyme A biosynthesis I Pantothenate and CoA biosynthesis Steroid hormone biosynthesis | details |
| TreatCFM000261 | mitochondrion_organization microtubule microtubule-based process GTPase activity ubiquitin-protein ligase activity Ubiquitin_Proteasome_system, E2: UBC | details |
| TreatCFM000430 | microtubule-based process microtubule eukaryotic translation initiation factor 3 complex acid phosphatase activity GTPase activity translation initiation factor activity cytoplasm Ubiquitin_Proteasome_system, DUB: JAMM phosphate acquisition Tuberculosis | details |
| TreatCFM000535 | isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway dimethylallyl diphosphate biosynthetic process 4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity microtubule microtubule-based process dimethylallyltranstransferase activity GTPase activity multicellular organismal development guanosine nucleotides degradation II methylerythritol phosphate pathway II methylerythritol phosphate pathway I guanosine nucleotides degradation I cis-zeatin biosynthesis pyrimidine salvage pathway adenosine nucleotides degradation I Zeatin biosynthesis Nicotinate and nicotinamide metabolism | details |
| TreatCFM000596 | riboflavin kinase activity microtubule riboflavin biosynthetic process microtubule-based process GTPase activity flavin biosynthesis I (bacteria and plants) Riboflavin metabolism | details |
| TreatCFM000608 | microtubule-based process microtubule GTPase activity Ubiquitin_Proteasome_system, DUB: USP Transcription_related, Transcription factor: MYB-RELATED Epstein-Barr virus infection | details |
| TreatCFM000619 | Ubiquitin_Proteasome_system, E3 adaptor: F-box acyl-CoA hydrolysis ω-hydroxylation of caprate and laurate | details |
| TreatCFM000692 | mitochondrion_organization microtubule-based process microtubule prenyltransferase activity protein serine/threonine kinase activity GTPase activity vitamin E biosynthesis (tocotrienols) Ubiquinone and other terpenoid-quinone biosynthesis | details |
| TreatCFM000882 | transcription factor activity,transcription factor binding microtubule-based process GTPase activity microtubule Transcription_related, Transcription factor: GRAS pseudouridine degradation folate transformations II One carbon pool by folate Pyrimidine metabolism | details |
| TreatCFM001051 | microtubule 3-hydroxyacyl-CoA_dehydrogenase_activity fructose_1,6-bisphosphate_1-phosphatase_activity phosphoric ester hydrolase activity Ubiquitin_Proteasome_system, E3 adaptor: F-box Transcription_related, Transcription factor: bZIP Insulin signaling pathway Caprolactam degradation PPAR signaling pathway Alzheimer's disease | details |
| TreatCFM001140 | microtubule protein domain specific binding acid phosphatase activity microtubule-based process GTPase activity phosphate acquisition Tuberculosis | details |
| TreatCFM001141 | nucleoside metabolic process acyl-CoA hydrolysis ω-hydroxylation of caprate and laurate Terpenoid backbone biosynthesis Ubiquinone and other terpenoid-quinone biosynthesis | details |
| TreatCFM001142 | methyltransferase activity γ-glutamyl cycle Glutathione metabolism | details |
| TreatCFM001160 | microtubule-based process microtubule acid phosphatase activity GTPase activity phosphate acquisition Tuberculosis | details |
| TreatCFM001309 | microtubule-based process microtubule acid phosphatase activity heat shock protein binding unfolded protein binding GTPase activity Ubiquitin_Proteasome_system, DUB: USP phosphate acquisition Tuberculosis | details |
| TreatCFM001341 | microtubule microtubule-based process GTPase activity hydroxyacylglutathione hydrolase activity phosphoribosylanthranilate isomerase activity methylglyoxal_catabolic_process_to_D-lactate tryptophan metabolic process biosynthetic process coenzyme A biosynthesis I methylglyoxal degradation I tryptophan biosynthesis Pyruvate metabolism Phenylalanine, tyrosine and tryptophan biosynthesis Pantothenate and CoA biosynthesis Nicotinate and nicotinamide metabolism | details |
| TreatCFM001410 | microtubule microtubule-based process GTPase activity hydrolase activity aspartic-type endopeptidase activity pyrimidine salvage pathway guanosine nucleotides degradation II guanosine nucleotides degradation I adenosine nucleotides degradation I UTP and CTP dephosphorylation I Nicotinate and nicotinamide metabolism Purine metabolism | details |
Expression profiles
 Show details about module gene expression profiling |