TreatCFM000850 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.002399186 | GO:0050515 |
| nucleobase-containing compound kinase activity | 0.007193415 | GO:0019205 |
| isomerase activity | 0.007989002 | GO:0016853 |
| terpenoid biosynthetic process | 0.008394734 | GO:0016114 |
| cytoplasm | 0.022399502 | GO:0005737 |
| nucleobase-containing compound metabolic process | 0.023342276 | GO:0006139 |
| ATP binding | 0.03513796 | GO:0005524 |
| protein folding | 0.041737458 | GO:0006457 |
| methylerythritol phosphate pathway II | 0.011728378 | plantCyc |
| methylerythritol phosphate pathway I | 0.011728378 | plantCyc |
| UDP-glucose biosynthesis | 0.011728378 | plantCyc |
| glucose and glucose-1-phosphate degradation | 0.011728378 | plantCyc |
| sucrose biosynthesis II | 0.014584392 | plantCyc |
| sucrose degradation III (sucrose invertase) | 0.014584392 | plantCyc |
| starch biosynthesis | 0.016065193 | plantCyc |
| adenosine ribonucleotides de novo biosynthesis | 0.023784613 | plantCyc |
| Glycolysis / Gluconeogenesis | 0.007909112 | KEGG |
| Ribosome biogenesis in eukaryotes | 0.007909112 | KEGG |
| Terpenoid backbone biosynthesis | 0.012371691 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g009010.2 | 4-(cytidine 5\'-phospho)-2-C-methyl-D-erithritol kinase | AT2G26930 (2.00E-137) |
| Solyc01g095470.2 | Galactose mutarotase-like superfamily protein | AT3G61610 (5.00E-141) |
| Solyc02g088520.2 | ||
| Solyc06g065270.2 | adenosine monophosphate kinase | AT5G47840 (2.00E-85) |
| Solyc07g042250.2 | chaperonin 20 | AT5G20720 (7.00E-100) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000661 | intramolecular lyase activity Transcription_related, Transcription factor: NF-YA Flavonoid biosynthesis Flavonoid biosynthesis Flavonoid biosynthesis Cationic antimicrobial peptide (CAMP) resistance | details |
| TreatCFM000662 | intramolecular lyase activity pseudouridine synthesis RNA modification pseudouridine synthase activity Flavonoid biosynthesis Flavonoid biosynthesis Flavonoid biosynthesis Cationic antimicrobial peptide (CAMP) resistance | details |
| TreatCFM000969 | mitochondrion_organization terpenoid biosynthetic process 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity isocitrate lyase activity prenyltransferase activity carboxylic acid metabolic process chromatin binding Transcription_related, Transcription regulator: PHD methylerythritol phosphate pathway I methylerythritol phosphate pathway II vitamin E biosynthesis (tocotrienols) Nicotinate and nicotinamide metabolism Ubiquinone and other terpenoid-quinone biosynthesis Terpenoid backbone biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |