TreatCFM001033 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| 5'-nucleotidase_activity | 0.002849905 | GO:0008253 |
| protein transport | 0.006031345 | GO:0015031 |
| GTPase activator activity | 0.009961752 | GO:0005096 |
| magnesium ion binding | 0.03954708 | GO:0000287 |
| guanosine nucleotides degradation I | 0.016406532 | plantCyc |
| guanosine nucleotides degradation II | 0.016406532 | plantCyc |
| pyrimidine salvage pathway | 0.016406532 | plantCyc |
| adenosine nucleotides degradation I | 0.023096611 | plantCyc |
| UTP and CTP dephosphorylation I | 0.036440623 | plantCyc |
| Nicotinate and nicotinamide metabolism | 0.008606911 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g072130.2 | SecY protein transport family protein | AT2G34250 (0) |
| Solyc04g079350.1 | Protein of unknown function (DUF1645) | |
| Solyc07g063550.2 | ARF-GAP domain 5 | AT5G54310 (2.00E-130) |
| Solyc10g078590.1 | AT5G18130 (7.00E-32) | |
| Solyc10g080500.1 | actin-11 | AT3G12110 (0) |
| Solyc11g006420.1 | 5\'-nucleotidases;magnesium ion binding | AT2G38680 (2.00E-111) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000604 | queuosine biosynthetic process tRNA modification queuine tRNA-ribosyltransferase activity 5'-nucleotidase_activity cytoplasm guanosine nucleotides degradation I pyrimidine salvage pathway guanosine nucleotides degradation II 2-oxoisovalerate decarboxylation to isobutanoyl-CoA adenosine nucleotides degradation I UTP and CTP dephosphorylation I Nicotinate and nicotinamide metabolism Valine, leucine and isoleucine degradation | details |
| TreatCFM000753 | 5'-nucleotidase_activity sequence-specific DNA binding protein kinase activity protein phosphorylation sequence-specific DNA binding transcription factor activity Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Protein_kinases_phosphatases, PPC:1.9.1: CRPK1 Like Kinase (Types 1 and 2) Transcription_related, Transcription factor: HSF glycerophosphodiester degradation guanosine nucleotides degradation I pyrimidine salvage pathway guanosine nucleotides degradation II adenosine nucleotides degradation I | details |
| TreatCFM000895 | ATP:ADP antiporter activity 5'-nucleotidase_activity Transcription_related, Transcription factor: GeBP Ubiquitin_Proteasome_system, E2: UBC Transcription_related, Transcription factor: bZIP pyrimidine salvage pathway guanosine nucleotides degradation I guanosine nucleotides degradation II adenosine nucleotides degradation I Ubiquinone and other terpenoid-quinone biosynthesis Nicotinate and nicotinamide metabolism | details |
| TreatCFM001211 | 5'-nucleotidase_activity Transcription_related, Transcription factor: ERF guanosine nucleotides degradation II pyrimidine salvage pathway guanosine nucleotides degradation I adenosine nucleotides degradation I Nicotinate and nicotinamide metabolism Circadian entrainment | details |
| TreatCFM001228 | glucose-6-phosphate dehydrogenase activity 5'-nucleotidase_activity glucose metabolic process NADP binding guanosine nucleotides degradation I pentose phosphate pathway (oxidative branch) I guanosine nucleotides degradation II pyrimidine salvage pathway adenosine nucleotides degradation I Nicotinate and nicotinamide metabolism Central carbon metabolism in cancer hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM001340 | 5'-nucleotidase_activity queuine tRNA-ribosyltransferase activity queuosine biosynthetic process tRNA modification cytoplasm guanosine nucleotides degradation I pyrimidine salvage pathway guanosine nucleotides degradation II 2-oxoisovalerate decarboxylation to isobutanoyl-CoA adenosine nucleotides degradation I UTP and CTP dephosphorylation I Nicotinate and nicotinamide metabolism Valine, leucine and isoleucine degradation | details |
Expression profiles
 Show details about module gene expression profiling |