TreatCFM001211 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| 5'-nucleotidase_activity | 0.006475938 | GO:0008253 |
| Transcription_related, Transcription factor: ERF | 0.036199989 | gene family |
| guanosine nucleotides degradation II | 0.024582196 | plantCyc |
| pyrimidine salvage pathway | 0.024582196 | plantCyc |
| guanosine nucleotides degradation I | 0.024582196 | plantCyc |
| adenosine nucleotides degradation I | 0.034573248 | plantCyc |
| Nicotinate and nicotinamide metabolism | 0.019322991 | KEGG |
| Circadian entrainment | 0.002331338 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc03g026010.1 | AT5G52180 (2.00E-108) | |
| Solyc03g031600.2 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | AT4G14305 (3.00E-54) |
| Solyc03g079850.2 | guanylyl cyclase 1 | AT5G05930 (3.00E-71) |
| Solyc04g072900.1 | related to AP2 4 | AT1G78080 (5.00E-48) |
| Solyc07g055660.2 | glycine-rich protein | |
| Solyc08g006000.2 | Protein of unknown function (DUF1218) | AT4G31130 (9.00E-71) |
| Solyc10g080500.1 | actin-11 | AT3G12110 (0) |
| Solyc11g006420.1 | 5\'-nucleotidases;magnesium ion binding | AT2G38680 (2.00E-111) |
| Solyc11g008430.1 | Ras-related small GTP-binding family protein | AT3G54840 (4.00E-94) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000487 | details | |
| TreatCFM000604 | queuosine biosynthetic process tRNA modification queuine tRNA-ribosyltransferase activity 5'-nucleotidase_activity cytoplasm guanosine nucleotides degradation I pyrimidine salvage pathway guanosine nucleotides degradation II 2-oxoisovalerate decarboxylation to isobutanoyl-CoA adenosine nucleotides degradation I UTP and CTP dephosphorylation I Nicotinate and nicotinamide metabolism Valine, leucine and isoleucine degradation | details |
| TreatCFM000753 | 5'-nucleotidase_activity sequence-specific DNA binding protein kinase activity protein phosphorylation sequence-specific DNA binding transcription factor activity Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Protein_kinases_phosphatases, PPC:1.9.1: CRPK1 Like Kinase (Types 1 and 2) Transcription_related, Transcription factor: HSF glycerophosphodiester degradation guanosine nucleotides degradation I pyrimidine salvage pathway guanosine nucleotides degradation II adenosine nucleotides degradation I | details |
| TreatCFM000895 | ATP:ADP antiporter activity 5'-nucleotidase_activity Transcription_related, Transcription factor: GeBP Ubiquitin_Proteasome_system, E2: UBC Transcription_related, Transcription factor: bZIP pyrimidine salvage pathway guanosine nucleotides degradation I guanosine nucleotides degradation II adenosine nucleotides degradation I Ubiquinone and other terpenoid-quinone biosynthesis Nicotinate and nicotinamide metabolism | details |
| TreatCFM001033 | 5'-nucleotidase_activity protein transport GTPase activator activity magnesium ion binding guanosine nucleotides degradation I guanosine nucleotides degradation II pyrimidine salvage pathway adenosine nucleotides degradation I UTP and CTP dephosphorylation I Nicotinate and nicotinamide metabolism | details |
| TreatCFM001228 | glucose-6-phosphate dehydrogenase activity 5'-nucleotidase_activity glucose metabolic process NADP binding guanosine nucleotides degradation I pentose phosphate pathway (oxidative branch) I guanosine nucleotides degradation II pyrimidine salvage pathway adenosine nucleotides degradation I Nicotinate and nicotinamide metabolism Central carbon metabolism in cancer hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM001340 | 5'-nucleotidase_activity queuine tRNA-ribosyltransferase activity queuosine biosynthetic process tRNA modification cytoplasm guanosine nucleotides degradation I pyrimidine salvage pathway guanosine nucleotides degradation II 2-oxoisovalerate decarboxylation to isobutanoyl-CoA adenosine nucleotides degradation I UTP and CTP dephosphorylation I Nicotinate and nicotinamide metabolism Valine, leucine and isoleucine degradation | details |
| TreatCFM001459 | protein dephosphorylation protein tyrosine/serine/threonine phosphatase activity EGFR tyrosine kinase inhibitor resistance | details |
Expression profiles
 Show details about module gene expression profiling |