TreatCFM001151 module
|
Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| malate_dehydrogenase_(decarboxylating)_(NAD+)_activity | 0.020228551 | GO:0004471 |
| sulfate adenylyltransferase (ATP) activity | 0.020228551 | GO:0004781 |
| hydrolase activity, acting on glycosyl bonds | 0.023589787 | GO:0016798 |
| Cytochrome_P450, Cytochrome P450: CYP79C | 0.002849905 | gene family |
| adhesion to carbohydrates, Glycoside Hydrolases:CBM18;hydrolysis and/or rearrangement of glycosidic bonds, Carbohydrate-Binding Modules:GH19 | 0.006170351 | gene family |
| Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII | 0.012002657 | gene family |
| sulfate activation for sulfonation | 0.003323932 | plantCyc |
| sulfate reduction II (assimilatory) | 0.003323932 | plantCyc |
| gluconeogenesis I | 0.022999734 | plantCyc |
| Monobactam biosynthesis | 0.020678183 | KEGG |
| Plant-pathogen interaction | 0.020678183 | KEGG |
| Carbon fixation in photosynthetic organisms | 0.037320845 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g091840.2 | Leucine-rich receptor-like protein kinase family protein | AT5G65700 (0) |
| Solyc03g005250.2 | ATP sulfurylase 1 | AT3G22890 (0) |
| Solyc06g076430.2 | type one serine/threonine protein phosphatase 2 | AT5G59160 (3.00E-161) |
| Solyc08g007370.2 | RNA binding;abscisic acid binding | AT2G47310 (2.00E-63) |
| Solyc12g044600.2 | NADP-malic enzyme 4 | AT1G79750 (0) |
| Solyc12g088210.1 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | AT1G58370 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000091 | protein_prenylation protein methylation protein prenyltransferase activity Transcription_related, Transcription factor: B3 | details |
| TreatCFM000846 | retromer complex Smc5-Smc6_complex double-strand break repair via homologous recombination retrograde transport, endosome to Golgi chromatin modification protein transport protein transporter activity hydrolase activity, acting on glycosyl bonds Cytochrome_P450, Cytochrome P450: CYP79C adhesion to carbohydrates, Glycoside Hydrolases:CBM18;hydrolysis and/or rearrangement of glycosidic bonds, Carbohydrate-Binding Modules:GH19 Plant-pathogen interaction | details |
| TreatCFM001058 | hydrolase activity | details |
| TreatCFM001077 | ADP-dependent NAD(P)H-hydrate dehydratase activity nucleosome assembly nucleosome protein domain specific binding NADH repair sporopollenin precursor biosynthesis Monoterpenoid biosynthesis | details |
| TreatCFM001081 | oxidoreductase activity, acting on the CH-NH2 group of donors riboflavin kinase activity pyridoxamine-phosphate oxidase activity riboflavin biosynthetic process FMN binding NADH repair flavin biosynthesis I (bacteria and plants) pyridoxal 5'-phosphate salvage I pyridoxal 5'-phosphate salvage II (plants) Vitamin B6 metabolism Riboflavin metabolism mRNA surveillance pathway | details |
Expression profiles
 Show details about module gene expression profiling |