TreatCFM000091 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| protein_prenylation | 0.002417753 | GO:0018342 |
| protein methylation | 0.003020626 | GO:0006479 |
| protein prenyltransferase activity | 0.006715981 | GO:0008318 |
| Transcription_related, Transcription factor: B3 | 0.015018602 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g111410.2 | Protein prenylyltransferase superfamily protein | AT1G10095 (1.00E-109) |
| Solyc03g093300.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | AT5G61450 (6.00E-155) |
| Solyc04g008860.2 | protein arginine methyltransferase 6 | AT3G20020 (3.00E-166) |
| Solyc04g015520.2 | Remorin family protein | AT2G41870 (1.00E-38) |
| Solyc06g076430.2 | type one serine/threonine protein phosphatase 2 | AT5G59160 (3.00E-161) |
| Solyc07g066340.2 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | AT1G16650 (3.00E-159) |
| Solyc08g006220.2 | Transcriptional factor B3 family protein | AT2G24700 (2.00E-35) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000846 | retromer complex Smc5-Smc6_complex double-strand break repair via homologous recombination retrograde transport, endosome to Golgi chromatin modification protein transport protein transporter activity hydrolase activity, acting on glycosyl bonds Cytochrome_P450, Cytochrome P450: CYP79C adhesion to carbohydrates, Glycoside Hydrolases:CBM18;hydrolysis and/or rearrangement of glycosidic bonds, Carbohydrate-Binding Modules:GH19 Plant-pathogen interaction | details |
| TreatCFM001058 | hydrolase activity | details |
| TreatCFM001077 | ADP-dependent NAD(P)H-hydrate dehydratase activity nucleosome assembly nucleosome protein domain specific binding NADH repair sporopollenin precursor biosynthesis Monoterpenoid biosynthesis | details |
| TreatCFM001081 | oxidoreductase activity, acting on the CH-NH2 group of donors riboflavin kinase activity pyridoxamine-phosphate oxidase activity riboflavin biosynthetic process FMN binding NADH repair flavin biosynthesis I (bacteria and plants) pyridoxal 5'-phosphate salvage I pyridoxal 5'-phosphate salvage II (plants) Vitamin B6 metabolism Riboflavin metabolism mRNA surveillance pathway | details |
| TreatCFM001151 | malate_dehydrogenase_(decarboxylating)_(NAD+)_activity sulfate adenylyltransferase (ATP) activity hydrolase activity, acting on glycosyl bonds Cytochrome_P450, Cytochrome P450: CYP79C adhesion to carbohydrates, Glycoside Hydrolases:CBM18;hydrolysis and/or rearrangement of glycosidic bonds, Carbohydrate-Binding Modules:GH19 Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII sulfate activation for sulfonation sulfate reduction II (assimilatory) gluconeogenesis I Monobactam biosynthesis Plant-pathogen interaction Carbon fixation in photosynthetic organisms | details |
| TreatCFM001236 | protein methylation core TFIIH complex peptidyl-arginine_N-methylation methyltransferase activity nucleotide-excision repair chromatin binding protein ubiquitination Transcription_related, Transcription regulator: PHD | details |
| TreatCFM001651 | protein prenyltransferase activity protein_prenylation signal transducer activity small GTPase mediated signal transduction Transcription_related, Transcription factor: STAT Transcription_related, Transcription regulator: C3H RNA degradation | details |
Expression profiles
 Show details about module gene expression profiling |