TreatCFM001174 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| 4 iron, 4 sulfur cluster binding | 0.004316546 | GO:0051539 |
| cytoplasm | 0.022399502 | GO:0005737 |
| GTP binding | 0.045436936 | GO:0005525 |
| Transcription_related, Transcription factor: C2H2 | 0.017299136 | gene family |
| Aminoacyl-tRNA biosynthesis | 0.029683144 | KEGG |
| Non-alcoholic fatty liver disease (NAFLD) | 0.032114139 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g102800.2 | Class II aaRS and biotin synthetases superfamily protein | AT3G02760 (0) |
| Solyc02g081410.2 | ARM repeat superfamily protein | AT3G02710 (0) |
| Solyc02g087240.2 | 51 kDa subunit of complex I | AT5G08530 (0) |
| Solyc06g005180.1 | C2H2-type zinc finger family protein | |
| Solyc07g007210.2 | Ribosomal protein S5/Elongation factor G/III/V family protein | AT1G06220 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000620 | methyltransferase activity Transcription_related, Transcription factor: C2H2 vitamin E biosynthesis (tocotrienols) vitamin E biosynthesis (tocotrienols) | details |
| TreatCFM001063 | Homologous recombination | details |
| TreatCFM001139 | mRNA_3'-end_processing protein domain specific binding Transcription_related, Transcription factor: C2H2 | details |
| TreatCFM001159 | vacuolar transport Ubiquitin_Proteasome_system, E3 adaptor: DWD Transcription_related, Transcription factor: C2H2 | details |
| TreatCFM001297 | transcription_corepressor_activity transcription, DNA-dependent formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: C2H2 xylogalacturonan biosynthesis | details |
| TreatCFM001298 | DNA replication | details |
| TreatCFM001425 | ATP hydrolysis coupled proton transport vacuolar proton-transporting V-type ATPase, V1 domain proton-transporting V-type ATPase, V0 domain protein domain specific binding hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances proton-transporting ATPase activity, rotational mechanism hydrogen ion transmembrane transporter activity Transcription_related, Transcription factor: C2H2 adenosine ribonucleotides de novo biosynthesis | details |
| TreatCFM001522 | nucleic acid binding anaphase-promoting complex regulation of mitotic metaphase/anaphase transition metalloexopeptidase activity aminopeptidase activity tRNA aminoacylation for protein translation aminoacyl-tRNA ligase activity Transcription_related, Transcription factor: C2H2 tRNA charging Aminoacyl-tRNA biosynthesis Herpes simplex infection | details |
| TreatCFM001544 | nucleic acid binding transport intracellular | details |
| TreatCFM001591 | dolichyl-diphosphooligosaccharide-protein glycotransferase activity protein glycosylation DNA-directed RNA polymerase activity endoplasmic reticulum transcription, DNA-dependent Transcription_related, Transcription factor: C2H2 Protein processing in endoplasmic reticulum | details |
| TreatCFM001610 | histone_H2A_acetylation negative_regulation_of_transcription,_DNA-templated histone_H4_acetylation NuA4_histone_acetyltransferase_complex chromatin remodeling protein domain specific binding DNA repair Transcription_related, Transcription factor: MYB-RELATED Transcription_related, Transcription factor: C2H2 | details |
Expression profiles
 Show details about module gene expression profiling |