TreatCFM001425 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| ATP hydrolysis coupled proton transport | 1.49364E-05 | GO:0015991 |
| vacuolar proton-transporting V-type ATPase, V1 domain | 0.001295486 | GO:0000221 |
| proton-transporting V-type ATPase, V0 domain | 0.001942558 | GO:0033179 |
| protein domain specific binding | 0.009983377 | GO:0019904 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.009983377 | GO:0016820 |
| proton-transporting ATPase activity, rotational mechanism | 0.009983377 | GO:0046961 |
| hydrogen ion transmembrane transporter activity | 0.013462046 | GO:0015078 |
| Transcription_related, Transcription factor: C2H2 | 0.017299136 | gene family |
| adenosine ribonucleotides de novo biosynthesis | 0.008751237 | plantCyc |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g110120.2 | vacuolar proton ATPase A3 | AT4G39080 (0) |
| Solyc06g005180.1 | C2H2-type zinc finger family protein | |
| Solyc06g052060.2 | ||
| Solyc07g005940.2 | vacuolar ATP synthase subunit H family protein | AT3G42050 (0) |
| Solyc12g057110.2 | general regulatory factor 2 | AT1G78300 (2.00E-128) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000620 | methyltransferase activity Transcription_related, Transcription factor: C2H2 vitamin E biosynthesis (tocotrienols) vitamin E biosynthesis (tocotrienols) | details |
| TreatCFM001063 | Homologous recombination | details |
| TreatCFM001126 | vacuolar proton-transporting V-type ATPase, V1 domain hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances protein domain specific binding proton-transporting ATPase activity, rotational mechanism ATP hydrolysis coupled proton transport Ubiquitin_Proteasome_system, E2: UBC indole-3-acetate activation I acyl-CoA hydrolysis ω-hydroxylation of caprate and laurate adenosine ribonucleotides de novo biosynthesis | details |
| TreatCFM001139 | mRNA_3'-end_processing protein domain specific binding Transcription_related, Transcription factor: C2H2 | details |
| TreatCFM001140 | microtubule protein domain specific binding acid phosphatase activity microtubule-based process GTPase activity phosphate acquisition Tuberculosis | details |
| TreatCFM001159 | vacuolar transport Ubiquitin_Proteasome_system, E3 adaptor: DWD Transcription_related, Transcription factor: C2H2 | details |
| TreatCFM001174 | 4 iron, 4 sulfur cluster binding cytoplasm GTP binding Transcription_related, Transcription factor: C2H2 Aminoacyl-tRNA biosynthesis Non-alcoholic fatty liver disease (NAFLD) | details |
| TreatCFM001282 | vacuolar proton-transporting V-type ATPase, V1 domain proton-transporting ATPase activity, rotational mechanism hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances ATP hydrolysis coupled proton transport fatty acid biosynthetic process Ubiquitin_Proteasome_system, E3 adaptor: F-box Fat digestion and absorption Non-alcoholic fatty liver disease (NAFLD) | details |
| TreatCFM001297 | transcription_corepressor_activity transcription, DNA-dependent formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: C2H2 xylogalacturonan biosynthesis | details |
| TreatCFM001298 | DNA replication | details |
| TreatCFM001522 | nucleic acid binding anaphase-promoting complex regulation of mitotic metaphase/anaphase transition metalloexopeptidase activity aminopeptidase activity tRNA aminoacylation for protein translation aminoacyl-tRNA ligase activity Transcription_related, Transcription factor: C2H2 tRNA charging Aminoacyl-tRNA biosynthesis Herpes simplex infection | details |
| TreatCFM001591 | dolichyl-diphosphooligosaccharide-protein glycotransferase activity protein glycosylation DNA-directed RNA polymerase activity endoplasmic reticulum transcription, DNA-dependent Transcription_related, Transcription factor: C2H2 Protein processing in endoplasmic reticulum | details |
| TreatCFM001610 | histone_H2A_acetylation negative_regulation_of_transcription,_DNA-templated histone_H4_acetylation NuA4_histone_acetyltransferase_complex chromatin remodeling protein domain specific binding DNA repair Transcription_related, Transcription factor: MYB-RELATED Transcription_related, Transcription factor: C2H2 | details |
| TreatCFM001656 | vacuolar proton-transporting V-type ATPase, V1 domain proton-transporting ATPase activity, rotational mechanism hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds histone_binding hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances nitrogen compound metabolic process ATP hydrolysis coupled proton transport Transcription_related, Transcription factor: Alfin-like Transcription_related, Transcription factor: C2H2 indole-3-acetate activation I S-methyl-5-thio-α-D-ribose 1-phosphate degradation Alanine, aspartate and glutamate metabolism Non-alcoholic fatty liver disease (NAFLD) | details |
Expression profiles
 Show details about module gene expression profiling |