TreatCFM001206 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| allantoin degradation to ureidoglycolate II (ammonia producing) | 0.001899116 | plantCyc |
| γ-glutamyl cycle | 0.001899116 | plantCyc |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g098810.2 | HSP20-like chaperones superfamily protein | AT1G54850 (3.00E-47) |
| Solyc01g108170.2 | ||
| Solyc02g068380.2 | allantoate amidohydrolase | AT4G20070 (0) |
| Solyc02g089230.2 | Thioredoxin superfamily protein | AT5G38900 (2.00E-78) |
| Solyc04g056330.1 | AIG2-like (avirulence induced gene) family protein | AT5G46720 (4.00E-37) |
| Solyc04g079550.2 | thylakoid processing peptide | AT2G30440 (6.00E-105) |
| Solyc05g005670.1 | ARM repeat superfamily protein | AT1G10560 (2.00E-147) |
| Solyc06g008890.2 | Protein kinase superfamily protein | AT5G20050 (4.00E-123) |
| Solyc06g074500.1 | Plant protein of unknown function (DUF868) | AT2G27770 (1.00E-86) |
| Solyc08g013690.1 | AP2/B3-like transcriptional factor family protein | AT1G01030 (6.00E-58) |
| Solyc10g006850.2 | ARF-GAP domain 5 | AT5G54310 (2.00E-108) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000277 | transcription factor complex Transcription_related, Transcription factor: E2F-DP Protein_kinases_phosphatases, PPC:5.2.1: Other Kinase Platinum drug resistance Quorum sensing | details |
| TreatCFM000598 | protein phosphorylation protein kinase activity serine-type peptidase activity Protein_kinases_phosphatases, PPC:4.5.4: GSK3/Shaggy Like Protein Kinase Family Protein_kinases_phosphatases, PPC:5.2.1: Other Kinase Transcription_related, Transcription factor: bZIP Platinum drug resistance Quorum sensing | details |
| TreatCFM000638 | coenzyme binding Transcription_related, Transcription factor: NF-YC allantoin degradation to ureidoglycolate II (ammonia producing) Purine metabolism Sesquiterpenoid and triterpenoid biosynthesis | details |
| TreatCFM000747 | S-adenosylmethionine_biosynthetic_process cell wall methionine adenosyltransferase activity Cytochrome_P450, Cytochrome P450: CYP724B hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 S-adenosyl-L-methionine biosynthesis methionine salvage cycle III (animals) allantoin degradation to ureidoglycolate II (ammonia producing) methionine salvage cycle I (bacteria and plants) S-adenosyl-L-methionine cycle II methionine degradation I (to homocysteine) brassinosteroid biosynthesis I brassinosteroid biosynthesis II methionine salvage cycle II (plants) ethylene biosynthesis I (plants) Cysteine and methionine metabolism Purine metabolism | details |
| TreatCFM000837 | hydrolase activity serine-type endopeptidase inhibitor activity response to wounding Transcription_related, Transcription factor: LOB allantoin degradation to ureidoglycolate II (ammonia producing) asparagine degradation I Cyanoamino acid metabolism Purine metabolism | details |
| TreatCFM000925 | methionine metabolic process S-adenosylmethionine_biosynthetic_process methylenetetrahydrofolate reductase (NADPH) activity methionine adenosyltransferase activity allantoin degradation to ureidoglycolate II (ammonia producing) methionine salvage cycle III (animals) methionine salvage cycle I (bacteria and plants) S-adenosyl-L-methionine biosynthesis S-adenosyl-L-methionine cycle II methionine degradation I (to homocysteine) fatty acid biosynthesis initiation I octanoyl-ACP biosynthesis (mitochondria, yeast) adenine and adenosine salvage II folate transformations II methionine salvage cycle II (plants) ethylene biosynthesis I (plants) Purine metabolism Cysteine and methionine metabolism Antifolate resistance Insulin resistance | details |
| TreatCFM000957 | steroid biosynthetic process 26,27-dehydrozymosterol metabolism plant sterol biosynthesis Steroid biosynthesis | details |
| TreatCFM001041 | Ubiquitin_Proteasome_system, DUB: ULP Transcription_related, Transcription regulator: Orphans allantoin degradation to ureidoglycolate II (ammonia producing) Purine metabolism | details |
| TreatCFM001095 | sequence-specific DNA binding sequence-specific DNA binding transcription factor activity serine-type peptidase activity N-acetyltransferase_activity Transcription_related, Transcription factor: WRKY Transcription_related, Transcription factor: BES1 Transcription_related, Transcription regulator: GNAT hydroxycinnamic acid tyramine amides biosynthesis suberin monomers biosynthesis Quorum sensing | details |
| TreatCFM001189 | fatty acid metabolic process acyl-[acyl-carrier-protein] desaturase activity GTPase activator activity Transcription_related, Transcription factor: TCP Transcription_related, Transcription factor: B3 acetaldehyde biosynthesis I pyruvate fermentation to ethanol II Biosynthesis of unsaturated fatty acids Sesquiterpenoid and triterpenoid biosynthesis Chemical carcinogenesis | details |
| TreatCFM001351 | acyl-[acyl-carrier-protein] desaturase activity GTPase activator activity fatty acid metabolic process Biosynthesis of unsaturated fatty acids Protein processing in endoplasmic reticulum | details |
| TreatCFM001484 | serine-type peptidase activity polysaccharide_binding Ubiquitin_Proteasome_system, E2: UBC allantoin degradation to ureidoglycolate II (ammonia producing) Purine metabolism Quorum sensing | details |
| TreatCFM001517 | S-adenosylmethionine_biosynthetic_process methionine adenosyltransferase activity allantoin degradation to ureidoglycolate II (ammonia producing) S-adenosyl-L-methionine biosynthesis methionine salvage cycle I (bacteria and plants) methionine salvage cycle III (animals) methionine degradation I (to homocysteine) S-adenosyl-L-methionine cycle II methionine salvage cycle II (plants) ethylene biosynthesis I (plants) Cysteine and methionine metabolism Purine metabolism Asthma | details |
| TreatCFM001568 | proton-transporting V-type ATPase, V1 domain ion_transmembrane_transport proton-transporting ATPase activity, rotational mechanism ATP hydrolysis coupled proton transport protein disulfide oxidoreductase activity vesicle-mediated transport adenosine ribonucleotides de novo biosynthesis | details |
| TreatCFM001601 | steroid biosynthetic process 3-beta-hydroxy-delta5-steroid dehydrogenase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor transmembrane_transporter_activity allantoin degradation to ureidoglycolate II (ammonia producing) UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-sugars interconversion L-ascorbate biosynthesis V superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Purine metabolism Amino sugar and nucleotide sugar metabolism | details |
Expression profiles
 Show details about module gene expression profiling |