TreatCFM001269 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| Transcription_related, Transcription factor: C2H2 | 0.017299136 | gene family |
| Starch and sucrose metabolism | 0.033377656 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc07g042730.2 | RNA-binding (RRM/RBD/RNP motifs) family protein | |
| Solyc08g005690.1 | ||
| Solyc08g061320.2 | CTC-interacting domain 7 | AT2G26280 (0) |
| Solyc09g057920.2 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT5G58450 (5.00E-131) |
| Solyc10g077110.1 | transcription factor IIIA | AT1G72050 (2.00E-105) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000204 | hydrolase_activity,_acting_on_acid_anhydrides Herpes simplex infection | details |
| TreatCFM000354 | Cdc73/Paf1 complex valyl-tRNA aminoacylation histone modification valine-tRNA ligase activity gene silencing by RNA tRNA aminoacylation for protein translation Transcription_related, Transcription regulator: SNF2 tRNA charging | details |
| TreatCFM000391 | nucleotide binding alanyl-tRNA aminoacylation 7-methylguanosine mRNA capping valyl-tRNA aminoacylation alanine-tRNA ligase activity mRNA guanylyltransferase activity valine-tRNA ligase activity ligase activity, forming aminoacyl-tRNA and related compounds tRNA aminoacylation mRNA processing protein tyrosine/serine/threonine phosphatase activity tRNA aminoacylation for protein translation aminoacyl-tRNA ligase activity tRNA charging Aminoacyl-tRNA biosynthesis mRNA surveillance pathway Phenylpropanoid biosynthesis hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM000526 | SAGA-type_complex transcription_corepressor_activity small GTPase mediated signal transduction transcription, DNA-dependent Transcription_related, Transcription factor: C2H2 Transcription_related, Transcription factor: bHLH | details |
| TreatCFM000570 | phosphatidylinositol binding | details |
| TreatCFM000766 | nucleic acid binding isocitrate dehydrogenase (NADP+) activity mRNA guanylyltransferase activity nucleotide binding alanine-tRNA ligase activity isocitrate metabolic process 7-methylguanosine mRNA capping alanyl-tRNA aminoacylation ligase activity, forming aminoacyl-tRNA and related compounds tRNA charging glutamine biosynthesis III mRNA surveillance pathway Aminoacyl-tRNA biosynthesis Lipopolysaccharide biosynthesis | details |
| TreatCFM000993 | formation of glycosidic bonds, GlycosylTransferases: GTnc cytokinin-O-glucosides biosynthesis Zeatin biosynthesis | details |
| TreatCFM000996 | Transcription_related, Transcription factor: C2H2 RNA degradation | details |
| TreatCFM001100 | Transcription_related, Transcription regulator: HB | details |
| TreatCFM001157 | Ubiquitin_Proteasome_system, E3: U-box tRNA charging Lipopolysaccharide biosynthesis | details |
| TreatCFM001216 | tRNA processing Ubiquitin_Proteasome_system, E3 adaptor: DWD acyl-CoA hydrolysis ω-hydroxylation of caprate and laurate detoxification of reactive carbonyls in chloroplasts RNA transport Bile secretion | details |
| TreatCFM001373 | mRNA guanylyltransferase activity ubiquitin-specific_protease_activity 7-methylguanosine mRNA capping protein tyrosine/serine/threonine phosphatase activity protein_deubiquitination mRNA processing protein dephosphorylation Ubiquitin_Proteasome_system, DUB: OTU Transcription_related, Transcription factor: C2H2 mRNA surveillance pathway | details |
| TreatCFM001494 | microtubule-based process microtubule chromatin binding GTPase activity Nicotinate and nicotinamide metabolism | details |
| TreatCFM001525 | organic substance metabolic process intramolecular transferase activity, phosphotransferases UDP-N-acetyl-D-glucosamine biosynthesis II Amino sugar and nucleotide sugar metabolism | details |
| TreatCFM001640 | valyl-tRNA aminoacylation nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 7-methylguanosine mRNA capping valine-tRNA ligase activity mRNA guanylyltransferase activity mRNA processing tRNA aminoacylation for protein translation cytoplasm protein tyrosine/serine/threonine phosphatase activity helicase activity aminoacyl-tRNA ligase activity protein dephosphorylation tRNA charging mRNA surveillance pathway Aminoacyl-tRNA biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |