TreatCFM001390 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| phosphatidylinositol-3-phosphate_binding | 0.001199593 | GO:0032266 |
| ubiquitin_binding | 0.001199593 | GO:0043130 |
| Protein_kinases_phosphatases, PPC:2.1.2: Ankyrin Repeat Domain Kinase | 0.002158895 | gene family |
| Transcription_related, Transcription regulator: HB | 0.022751567 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g009610.2 | ||
| Solyc01g096910.2 | EAP30/Vps36 family protein | AT5G04920 (1.00E-152) |
| Solyc02g071740.2 | Integrin-linked protein kinase family | AT4G18950 (1.00E-167) |
| Solyc07g007120.2 | KNOTTED1-like homeobox gene 3 | AT5G25220 (1.00E-121) |
| Solyc11g066280.1 | Ribosomal RNA processing Brix domain protein | AT4G01560 (2.00E-129) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000862 | endoplasmic reticulum membrane N-acetyltransferase_activity Transcription_related, Transcription regulator: GNAT Transcription_related, Transcription regulator: HB UDP-N-acetyl-D-glucosamine biosynthesis II Amino sugar and nucleotide sugar metabolism | details |
| TreatCFM001053 | ionotropic glutamate receptor activity Transcription_related, Transcription regulator: HB | details |
| TreatCFM001254 | phosphatidylinositol-3-phosphate_binding ubiquitin_binding lipid metabolic process Transcription_related, Transcription factor: TUB | details |
| TreatCFM001363 | Wnt signaling pathway Endocrine resistance | details |
| TreatCFM001391 | carbonate dehydratase activity Collecting duct acid secretion Endocrine resistance | details |
| TreatCFM001479 | isocitrate dehydrogenase (NADP+) activity phosphatidylinositol-3-phosphate_binding ubiquitin_binding methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity isocitrate metabolic process folic acid-containing compound biosynthetic process catalytic activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor pyridoxal phosphate binding biosynthetic process oxidation-reduction process tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate alanine biosynthesis II alanine degradation III alanine degradation II (to D-lactate) tetrahydrofolate biosynthesis II folate transformations II glutamine biosynthesis III Peroxisome One carbon pool by folate Fructose and mannose metabolism Arginine biosynthesis Isoflavonoid biosynthesis | details |
| TreatCFM001536 | ARF guanyl-nucleotide exchange factor activity regulation of ARF protein signal transduction protein kinase activity protein phosphorylation Protein_kinases_phosphatases, PPC:2.1.2: Ankyrin Repeat Domain Kinase TCA cycle II (plants and fungi) glutamine biosynthesis III glyoxylate cycle TCA cycle variation V (plant) Carbon fixation pathways in prokaryotes Platinum drug resistance | details |
| TreatCFM001559 | Transcription_related, Transcription regulator: HB Primary immunodeficiency | details |
| TreatCFM001562 | mitochondrial envelope methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity isocitrate dehydrogenase (NADP+) activity isocitrate metabolic process folic acid-containing compound biosynthetic process cytochrome-c oxidase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Protein_kinases_phosphatases, PPC:2.1.2: Ankyrin Repeat Domain Kinase tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate folate transformations II tetrahydrofolate biosynthesis II glutamine biosynthesis III One carbon pool by folate hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM001615 | ubiquitin_binding phosphatidylinositol-3-phosphate_binding alpha-L-fucosidase activity protein glycosylation galactosyltransferase activity carbohydrate binding GTPase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Other glycan degradation Glycosaminoglycan biosynthesis - heparan sulfate / heparin hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
Expression profiles
 Show details about module gene expression profiling |