TreatCFM001615 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| ubiquitin_binding | 0.00312991 | GO:0043130 |
| phosphatidylinositol-3-phosphate_binding | 0.00312991 | GO:0032266 |
| alpha-L-fucosidase activity | 0.004172732 | GO:0004560 |
| protein glycosylation | 0.015086176 | GO:0006486 |
| galactosyltransferase activity | 0.017194688 | GO:0008378 |
| carbohydrate binding | 0.02808496 | GO:0030246 |
| GTPase activity | 0.02808496 | GO:0003924 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.009048058 | gene family |
| Other glycan degradation | 0.006472955 | KEGG |
| Glycosaminoglycan biosynthesis - heparan sulfate / heparin | 0.007112874 | KEGG |
| hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | 0.001295486 | gene famuly |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g096910.2 | EAP30/Vps36 family protein | AT5G04920 (1.00E-152) |
| Solyc02g070400.2 | Galactosyltransferase family protein | AT4G21060 (0) |
| Solyc09g065810.2 | Guanylate-binding family protein | AT2G38840 (0) |
| Solyc11g069010.1 | alpha-L-fucosidase 1 | AT2G28100 (0) |
| Solyc12g009790.1 | Calcium-dependent lipid-binding (CaLB domain) family protein | AT1G05500 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001090 | biosynthetic process protein phosphorylation Protein_kinases_phosphatases, PPC:5.2.1: Other Kinase S-methylmethionine cycle Selenocompound metabolism Platinum drug resistance Endocrine resistance | details |
| TreatCFM001254 | phosphatidylinositol-3-phosphate_binding ubiquitin_binding lipid metabolic process Transcription_related, Transcription factor: TUB | details |
| TreatCFM001390 | phosphatidylinositol-3-phosphate_binding ubiquitin_binding Protein_kinases_phosphatases, PPC:2.1.2: Ankyrin Repeat Domain Kinase Transcription_related, Transcription regulator: HB | details |
| TreatCFM001422 | kinase activity Proteasome glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) Central carbon metabolism in cancer | details |
| TreatCFM001479 | isocitrate dehydrogenase (NADP+) activity phosphatidylinositol-3-phosphate_binding ubiquitin_binding methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity isocitrate metabolic process folic acid-containing compound biosynthetic process catalytic activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor pyridoxal phosphate binding biosynthetic process oxidation-reduction process tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate alanine biosynthesis II alanine degradation III alanine degradation II (to D-lactate) tetrahydrofolate biosynthesis II folate transformations II glutamine biosynthesis III Peroxisome One carbon pool by folate Fructose and mannose metabolism Arginine biosynthesis Isoflavonoid biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |