TreatCFM001605 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| Transcription_related, Transcription factor: SBP | 0.014238041 | gene family |
| Transcription_related, Transcription factor: WRKY | 0.032311786 | gene family |
| 3-phosphoinositide biosynthesis | 0.012054355 | plantCyc |
| D-myo-inositol (1,4,5)-trisphosphate biosynthesis | 0.012054355 | plantCyc |
| Choline metabolism in cancer | 0.036532515 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g080670.2 | squamosa promoter binding protein-like 7 | AT5G18830 (8.00E-171) |
| Solyc01g088610.2 | GroES-like family protein | AT3G60210 (4.00E-53) |
| Solyc07g066220.2 | WRKY DNA-binding protein 2 | AT5G56270 (4.00E-142) |
| Solyc10g061960.1 | Histone H3 K4-specific methyltransferase SET7/9 family protein | AT4G17080 (8.00E-95) |
| Solyc12g019460.1 | MAP kinase 6 | AT2G43790 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000340 | galactose metabolic process transcription coactivator activity UDP-glucose:hexose-1-phosphate uridylyltransferase activity Transcription_related, Transcription regulator: Coactivator p15 pyrimidine deoxyribonucleotides dephosphorylation stachyose degradation Pyrimidine metabolism | details |
| TreatCFM000498 | transcription coactivator activity lipid binding DNA binding Transcription_related, Transcription regulator: Coactivator p15 Transcription_related, Transcription regulator: HB triacylglycerol degradation Vitamin digestion and absorption | details |
| TreatCFM000661 | intramolecular lyase activity Transcription_related, Transcription factor: NF-YA Flavonoid biosynthesis Flavonoid biosynthesis Flavonoid biosynthesis Cationic antimicrobial peptide (CAMP) resistance | details |
| TreatCFM000910 | glycopeptide_alpha-N-acetylgalactosaminidase_activity 3-phosphoinositide biosynthesis D-myo-inositol (1,4,5)-trisphosphate biosynthesis Choline metabolism in cancer hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM000982 | Protein_kinases_phosphatases, PPC:1.10.1: Receptor Like Cytoplasmic Kinase VI Transcription_related, Transcription factor: NF-YA Platinum drug resistance | details |
| TreatCFM001516 | cellular glucose homeostasis carbohydrate phosphorylation hexokinase activity glucose binding protein tyrosine/serine/threonine phosphatase activity phosphotransferase activity, alcohol group as acceptor protein dephosphorylation Transcription_related, Transcription factor: SBP phosphatidylglycerol biosynthesis II (non-plastidic) phosphatidylglycerol biosynthesis I (plastidic) cardiolipin biosynthesis II Oxidative phosphorylation Glycerophospholipid metabolism Type II diabetes mellitus | details |
| TreatCFM001556 | 2 iron, 2 sulfur cluster binding chlorophyllide a oxygenase [overall] activity small GTPase mediated signal transduction intracellular Transcription_related, Transcription regulator: Orphans chlorophyll cycle 3-phosphoinositide biosynthesis D-myo-inositol (1,4,5)-trisphosphate biosynthesis Porphyrin and chlorophyll metabolism Choline metabolism in cancer | details |
| TreatCFM001595 | F-actin capping protein complex barbed-end_actin_filament_capping D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3-phosphoinositide biosynthesis Choline metabolism in cancer | details |
| TreatCFM001641 | phosphatidylinositol binding Transcription_related, Transcription factor: SBP triacylglycerol degradation RNA degradation Vitamin digestion and absorption | details |
| TreatCFM001658 | polygalacturonate_4-alpha-galacturonosyltransferase_activity Transcription_related, Transcription factor: SBP formation of glycosidic bonds, GlycosylTransferases: GTnc homogalacturonan biosynthesis triacylglycerol degradation | details |
Expression profiles
 Show details about module gene expression profiling |