LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE010958

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE010958

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE010958AT1G66980.1suppressor of npr1-1 constitutive 41positive
GWHGAAZE010963AT1G66920.2Protein kinase superfamily protein0.97positive
GWHGAAZE028095AT1G21240.1wall associated kinase 30.96positive
GWHGAAZE015783AT2G26330.1Leucine-rich receptor-like protein kinase family protein0.96positive
GWHGAAZE020791----0.95positive
GWHGAAZE033676AT3G12500.1basic chitinase0.94positive
GWHGAAZE001732AT4G08850.1Leucine-rich repeat receptor-like protein kinase family protein0.94positive
GWHGAAZE011601AT1G59218.2Disease resistance protein (CC-NBS-LRR class) family0.94positive
GWHGAAZE019645AT2G36200.1P-loop containing nucleoside triphosphate hydrolases superfamily protein0.94positive
GWHGAAZE020635AT3G02645.1Plant protein of unknown function (DUF247)0.94positive
GWHGAAZE004970AT2G28780.1P-hydroxybenzoic acid efflux pump subunit;(source:Araport11)0.94positive
GWHGAAZE008002AT2G38290.1ammonium transporter 20.94positive
GWHGAAZE008178AT1G72520.1PLAT/LH2 domain-containing lipoxygenase family protein0.94positive
GWHGAAZE001306AT1G06410.1trehalose-phosphatase/synthase 70.94positive
GWHGAAZE015953AT1G80830.1natural resistance-associated macrophage protein 10.94positive
GWHGAAZE029378AT2G25010.1Aminotransferase-like, plant mobile domain family protein0.94positive
GWHGAAZE015935AT1G80830.1natural resistance-associated macrophage protein 10.94positive
GWHGAAZE015952AT1G15960.1NRAMP metal ion transporter 60.94positive
GWHGAAZE004104AT1G22400.1UDP-Glycosyltransferase superfamily protein0.94positive
GWHGAAZE004092AT1G22370.2UDP-glucosyl transferase 85A50.94positive
GWHGAAZE004090AT1G22380.1UDP-glucosyl transferase 85A30.94positive
GWHGAAZE029101AT3G12500.1basic chitinase0.94positive
GWHGAAZE021879AT4G38780.1Pre-mRNA-processing-splicing factor0.94positive
GWHGAAZE030243AT3G12500.1basic chitinase0.94positive
GWHGAAZE010966AT1G66920.2Protein kinase superfamily protein0.94positive
GWHGAAZE010479AT1G48120.1hydrolases;protein serine/threonine phosphatases0.94positive
GWHGAAZE015955AT1G15960.1NRAMP metal ion transporter 60.94positive
GWHGAAZE011423AT5G36228.1nucleic acid binding;zinc ion binding0.94positive
GWHGAAZE012104AT1G70960.1F-box and associated interaction domains-containing protein0.94positive
GWHGAAZE027840AT4G18490.2hypothetical protein;(source:Araport11)0.94positive
GWHGAAZE020796AT3G02645.1Plant protein of unknown function (DUF247)0.94positive
GWHGAAZE029108AT4G08850.1Leucine-rich repeat receptor-like protein kinase family protein0.94positive
GWHGAAZE020630AT3G02645.1Plant protein of unknown function (DUF247)0.94positive
GWHGAAZE029106AT3G12500.1basic chitinase0.94positive
GWHGAAZE015697AT1G35710.1Protein kinase family protein with leucine-rich repeat domain0.94positive
GWHGAAZE013346AT2G26260.13beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 20.94positive
GWHGAAZE029103AT3G12500.1basic chitinase0.94positive
GWHGAAZE029104AT3G12500.1basic chitinase0.94positive
GWHGAAZE033765AT5G38940.1RmlC-like cupins superfamily protein0.94positive
GWHGAAZE019387AT3G48310.1cytochrome P450, family 71, subfamily A, polypeptide 220.94positive
GWHGAAZE029105AT3G12500.1basic chitinase0.94positive
GWHGAAZE020636AT3G02645.1Plant protein of unknown function (DUF247)0.93positive
GWHGAAZE021465AT3G47570.1Leucine-rich repeat protein kinase family protein0.93positive
GWHGAAZE017172AT1G45616.1receptor like protein 60.93positive
GWHGAAZE011171AT4G08850.1Leucine-rich repeat receptor-like protein kinase family protein0.93positive
GWHGAAZE028743AT4G31980.1PPPDE thiol peptidase family protein;(source:Araport11)0.93positive
GWHGAAZE011215AT1G35710.1Protein kinase family protein with leucine-rich repeat domain0.93positive
GWHGAAZE028378----0.93positive
GWHGAAZE015998AT1G21270.1wall-associated kinase 20.93positive
GWHGAAZE004096AT1G22360.1UDP-glucosyl transferase 85A20.93positive
GWHGAAZE010962AT1G70250.1receptor serine/threonine kinase, putative0.93positive
GWHGAAZE033764AT5G39130.1RmlC-like cupins superfamily protein0.93positive
GWHGAAZE000923AT5G60770.1nitrate transporter 2.40.93positive
GWHGAAZE020013AT4G10310.1high-affinity K+ transporter 10.93positive
GWHGAAZE029102AT3G12500.1basic chitinase0.93positive
GWHGAAZE012127AT4G15530.6pyruvate orthophosphate dikinase0.92positive
GWHGAAZE033484AT2G13980.1Polynucleotidyl transferase, ribonuclease H-like superfamily protein0.92positive
GWHGAAZE022919AT1G60470.1galactinol synthase 40.92positive
GWHGAAZE015775AT2G26330.1Leucine-rich receptor-like protein kinase family protein0.92positive
GWHGAAZE027656AT5G67360.1Subtilase family protein0.92positive
GWHGAAZE019396AT3G48310.1cytochrome P450, family 71, subfamily A, polypeptide 220.92positive
GWHGAAZE020634AT3G02645.1Plant protein of unknown function (DUF247)0.92positive
GWHGAAZE033762AT5G39130.1RmlC-like cupins superfamily protein0.92positive
GWHGAAZE023587AT3G07040.1NB-ARC domain-containing disease resistance protein0.92positive
GWHGAAZE001311AT1G06410.1trehalose-phosphatase/synthase 70.92positive
GWHGAAZE010972AT1G70250.1receptor serine/threonine kinase, putative0.92positive
GWHGAAZE015175AT4G08850.1Leucine-rich repeat receptor-like protein kinase family protein0.92positive
GWHGAAZE009432AT2G42850.1cytochrome P450, family 7180.92positive
GWHGAAZE001509AT1G65090.3nucleolin;(source:Araport11)0.91positive
GWHGAAZE011244AT1G35710.1Protein kinase family protein with leucine-rich repeat domain0.91positive
GWHGAAZE033485AT1G29720.1Leucine-rich repeat transmembrane protein kinase0.91positive
GWHGAAZE010344AT1G35710.1Protein kinase family protein with leucine-rich repeat domain0.91positive
GWHGAAZE023271AT2G01050.1zinc ion binding;nucleic acid binding0.91positive
GWHGAAZE016402AT2G07505.1zinc ion binding0.91positive
GWHGAAZE015946AT1G15960.1NRAMP metal ion transporter 60.91positive
GWHGAAZE019687AT1G45616.1receptor like protein 60.91positive
GWHGAAZE033483AT1G70520.1cysteine-rich RLK (RECEPTOR-like protein kinase) 20.91positive
GWHGAAZE020413AT3G28890.2receptor like protein 430.91positive
GWHGAAZE028246AT2G20950.3Arabidopsis phospholipase-like protein (PEARLI 4) family0.91positive
GWHGAAZE027660AT5G67360.1Subtilase family protein0.91positive
GWHGAAZE020637AT3G02645.1Plant protein of unknown function (DUF247)0.91positive
GWHGAAZE020793AT3G02645.1Plant protein of unknown function (DUF247)0.91positive
GWHGAAZE033763AT5G39130.1RmlC-like cupins superfamily protein0.91positive
GWHGAAZE019400AT3G48310.1cytochrome P450, family 71, subfamily A, polypeptide 220.91positive
GWHGAAZE020626AT3G02645.1Plant protein of unknown function (DUF247)0.9positive
GWHGAAZE009559AT4G31940.1cytochrome P450, family 82, subfamily C, polypeptide 40.9positive
GWHGAAZE003551AT5G52400.1cytochrome P450, family 715, subfamily A, polypeptide 10.9positive
GWHGAAZE027653AT3G14067.1Subtilase family protein0.9positive
GWHGAAZE015768AT3G47570.1Leucine-rich repeat protein kinase family protein0.9positive
GWHGAAZE028406AT5G47390.1myb-like transcription factor family protein0.9positive
GWHGAAZE013411AT1G68740.1EXS (ERD1/XPR1/SYG1) family protein0.9positive
GWHGAAZE028153AT5G53110.1RING/U-box superfamily protein0.9positive
GWHGAAZE010954AT1G67000.1Protein kinase superfamily protein0.9positive
GWHGAAZE019736AT2G47120.1NAD(P)-binding Rossmann-fold superfamily protein0.9positive
GWHGAAZE011963AT5G51160.1Ankyrin repeat family protein0.9positive
GWHGAAZE009348AT3G08510.3phospholipase C 20.9positive
GWHGAAZE020813AT3G15420.1Transcription factor TFIIIC, tau55-related protein0.9positive
GWHGAAZE019388AT3G48320.1cytochrome P450, family 71, subfamily A, polypeptide 210.9positive
GWHGAAZE000297----0.89positive
GWHGAAZE033788AT4G05440.2temperature sensing protein-related0.89positive
GWHGAAZE009975AT4G01935.1insulin-induced protein;(source:Araport11)0.89positive
GWHGAAZE019988AT2G29110.1glutamate receptor 2.80.89positive
GWHGAAZE027652AT2G05920.1Subtilase family protein0.89positive
GWHGAAZE030114AT4G34770.1SAUR-like auxin-responsive protein family 0.89positive
GWHGAAZE029109AT1G35710.1Protein kinase family protein with leucine-rich repeat domain0.89positive
GWHGAAZE021464AT3G55800.1sedoheptulose-bisphosphatase0.89positive
GWHGAAZE014731AT4G37930.1serine transhydroxymethyltransferase 10.89positive
GWHGAAZE033768AT5G39130.1RmlC-like cupins superfamily protein0.89positive
GWHGAAZE015942AT1G15960.1NRAMP metal ion transporter 60.89positive
GWHGAAZE012191AT1G65450.2HXXXD-type acyl-transferase family protein0.89positive
GWHGAAZE021320AT5G36110.1cytochrome P450, family 716, subfamily A, polypeptide 10.88positive
GWHGAAZE008578AT1G18390.2Protein kinase superfamily protein0.88positive
GWHGAAZE000883AT3G45290.1Seven transmembrane MLO family protein0.88positive
GWHGAAZE033141AT5G15240.1Transmembrane amino acid transporter family protein0.88positive
GWHGAAZE011038AT3G06240.1F-box family protein0.88positive
GWHGAAZE004773AT3G25810.1Terpenoid cyclases/Protein prenyltransferases superfamily protein0.88positive
GWHGAAZE012083AT5G59530.12-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein0.88positive
GWHGAAZE019382AT3G48310.1cytochrome P450, family 71, subfamily A, polypeptide 220.88positive
GWHGAAZE003221AT1G74260.1purine biosynthesis 40.88positive
GWHGAAZE021177AT5G60150.1hypothetical protein;(source:Araport11)0.88positive
GWHGAAZE033791AT4G05440.2temperature sensing protein-related0.87positive
GWHGAAZE019059AT5G49740.1ferric reduction oxidase 70.87positive
GWHGAAZE000884----0.87positive
GWHGAAZE029823AT2G14620.1xyloglucan endotransglucosylase/hydrolase 100.87positive
GWHGAAZE015088AT4G09490.1Polynucleotidyl transferase, ribonuclease H-like superfamily protein0.87positive
GWHGAAZE032278AT5G45230.1Disease resistance protein (TIR-NBS-LRR class) family0.87positive
GWHGAAZE002047AT2G30980.1SHAGGY-related protein kinase dZeta0.87positive
GWHGAAZE017168AT1G45616.1receptor like protein 60.87positive
GWHGAAZE027654AT5G67360.1Subtilase family protein0.87positive
GWHGAAZE012074AT1G06620.12-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein0.86positive
GWHGAAZE020031AT5G11180.1glutamate receptor 2.60.86positive
GWHGAAZE013962AT3G31430.1zinc knuckle (CCHC-type) family protein;(source:Araport11)0.86positive
GWHGAAZE019623AT5G07610.1F-box family protein0.86positive
GWHGAAZE015043AT3G51480.1glutamate receptor 3.60.86positive
GWHGAAZE031808AT1G33540.1serine carboxypeptidase-like 180.86positive
GWHGAAZE019381AT3G48320.1cytochrome P450, family 71, subfamily A, polypeptide 210.86positive
GWHGAAZE023272AT1G33730.1cytochrome P450, family 76, subfamily C, polypeptide 50.86positive
GWHGAAZE012945AT2G38550.1Transmembrane proteins 14C0.86positive


Expression profiling, GSEA and motif analysis