LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE018617

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE018617

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE018617AT1G49970.1CLP protease proteolytic subunit 11positive
GWHGAAZE009243AT3G46550.1Fasciclin-like arabinogalactan family protein-0.68negative
GWHGAAZE003446AT2G45010.1PLAC8 family protein-0.65negative
GWHGAAZE013908-----0.65negative
GWHGAAZE027037AT4G26550.1Got1/Sft2-like vescicle transport protein family-0.64negative
GWHGAAZE003375AT1G61670.1Lung seven transmembrane receptor family protein-0.64negative
GWHGAAZE005894AT4G27745.1Yippee family putative zinc-binding protein-0.64negative
GWHGAAZE026917AT2G16030.1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein-0.63negative
GWHGAAZE016827AT2G19950.2golgin candidate 1-0.63negative
GWHGAAZE029880AT4G33640.1costars family protein;(source:Araport11)-0.63negative
GWHGAAZE012133AT5G18900.12-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein-0.63negative
GWHGAAZE024837AT5G05620.1gamma-tubulin complex protein 2-0.63negative
GWHGAAZE007307AT4G37820.1transmembrane protein;(source:Araport11)-0.62negative
GWHGAAZE019976AT3G10700.1galacturonic acid kinase-0.62negative
GWHGAAZE006213AT4G22580.1Exostosin family protein-0.62negative
GWHGAAZE023109AT5G13290.2Protein kinase superfamily protein-0.62negative
GWHGAAZE033197AT5G15050.1Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein-0.62negative
GWHGAAZE004658AT4G32551.1LisH dimerisation motif;WD40/YVTN repeat-like-containing domain-0.62negative
GWHGAAZE006857AT2G34770.1fatty acid hydroxylase 1-0.62negative
GWHGAAZE016922AT1G53050.1Protein kinase superfamily protein-0.62negative
GWHGAAZE027737AT4G16650.1O-fucosyltransferase family protein-0.62negative
GWHGAAZE018645AT1G10030.1homolog of yeast ergosterol28-0.62negative
GWHGAAZE024619AT4G30810.1serine carboxypeptidase-like 29-0.62negative
GWHGAAZE006870AT2G34770.1fatty acid hydroxylase 1-0.62negative
GWHGAAZE014583AT4G37020.1initiation factor 4A-like protein;(source:Araport11)-0.62negative
GWHGAAZE018597AT2G18990.1thioredoxin domain-containing protein 9 homolog-0.61negative
GWHGAAZE005365AT3G08780.1BRISC complex subunit Abro1-like protein;(source:Araport11)-0.61negative
GWHGAAZE000928AT5G04250.2Cysteine proteinases superfamily protein-0.61negative
GWHGAAZE027526AT2G17520.1Endoribonuclease/protein kinase IRE1-like-0.61negative
GWHGAAZE000733AT3G55530.1RING/U-box superfamily protein-0.61negative
GWHGAAZE030943AT1G52320.2kinesin-like protein;(source:Araport11)-0.61negative
GWHGAAZE023529AT2G16390.1SNF2 domain-containing protein / helicase domain-containing protein-0.61negative
GWHGAAZE026496AT1G06850.1basic leucine-zipper 52-0.61negative
GWHGAAZE005470AT5G59020.1Protein of unknown function (DUF3527)-0.61negative
GWHGAAZE030568AT1G74910.2ADP-glucose pyrophosphorylase family protein-0.61negative
GWHGAAZE026319AT3G53020.1Ribosomal protein L24e family protein-0.61negative
GWHGAAZE004398AT2G34680.1Outer arm dynein light chain 1 protein-0.6negative
GWHGAAZE025828AT2G28230.1TATA-binding related factor (TRF) of subunit 20 of Mediator complex-0.6negative
GWHGAAZE004622AT4G18460.1D-Tyr-tRNA(Tyr) deacylase family protein-0.6negative
GWHGAAZE013531AT5G12350.1Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-0.6negative
GWHGAAZE009959AT3G62390.1TRICHOME BIREFRINGENCE-LIKE 6-0.6negative
GWHGAAZE012791AT1G64090.2Reticulan like protein B3-0.6negative
GWHGAAZE009216AT5G59840.1Ras-related small GTP-binding family protein-0.6negative
GWHGAAZE025480AT3G26700.1Protein kinase superfamily protein-0.6negative
GWHGAAZE023058AT1G27930.1Protein of unknown function (DUF579)-0.6negative
GWHGAAZE020921AT3G25500.1formin homology 1-0.6negative
GWHGAAZE008396AT3G10250.2Plant protein 1589 of unknown function-0.6negative
GWHGAAZE031523AT4G22290.1Ubiquitin-specific protease family C19-related protein-0.6negative
GWHGAAZE013337AT4G14965.1membrane-associated progesterone binding protein 4-0.6negative
GWHGAAZE015643AT1G71900.1Protein of unknown function (DUF803)-0.6negative
GWHGAAZE005179AT1G54650.2Methyltransferase family protein-0.59negative
GWHGAAZE030067AT4G34590.1G-box binding factor 6-0.59negative
GWHGAAZE014397AT5G15350.1early nodulin-like protein 17-0.59negative
GWHGAAZE030168AT4G34860.2Plant neutral invertase family protein-0.59negative
GWHGAAZE017400AT1G79820.2Major facilitator superfamily protein-0.59negative
GWHGAAZE030082AT4G39080.1vacuolar proton ATPase A3-0.59negative
GWHGAAZE026541AT2G40316.1autophagy-like protein;(source:Araport11)-0.59negative
GWHGAAZE033615AT5G20590.1TRICHOME BIREFRINGENCE-LIKE 5-0.59negative
GWHGAAZE013483AT2G03350.1Protein of unknown function, DUF538-0.59negative
GWHGAAZE029418AT4G02080.1secretion-associated RAS super family 2-0.59negative
GWHGAAZE008167AT3G63530.2RING/U-box superfamily protein-0.59negative
GWHGAAZE006483AT4G22290.1Ubiquitin-specific protease family C19-related protein-0.59negative
GWHGAAZE033231AT5G14790.1ARM repeat superfamily protein-0.59negative
GWHGAAZE032608AT3G20780.1topoisomerase 6 subunit B-0.59negative
GWHGAAZE016687AT1G42960.1expressed protein localized to the inner membrane of the chloroplast.-0.59negative
GWHGAAZE026100AT5G10840.1Endomembrane protein 70 protein family-0.59negative
GWHGAAZE028439AT4G32830.1ataurora1-0.59negative
GWHGAAZE009681AT2G31140.1Peptidase S24/S26A/S26B/S26C family protein-0.59negative
GWHGAAZE014956AT4G35950.1RAC-like 6-0.59negative
GWHGAAZE029437AT1G14460.1AAA-type ATPase family protein-0.59negative
GWHGAAZE031983AT5G57440.1Haloacid dehalogenase-like hydrolase (HAD) superfamily protein-0.58negative
GWHGAAZE011037-----0.58negative
GWHGAAZE013707AT1G67410.1Exostosin family protein-0.58negative
GWHGAAZE011990AT3G23090.2TPX2 (targeting protein for Xklp2) protein family-0.58negative
GWHGAAZE017224AT5G50420.1O-fucosyltransferase family protein-0.58negative
GWHGAAZE006133AT4G11820.2hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase-0.58negative
GWHGAAZE004505AT4G18060.1SH3 domain-containing protein-0.58negative
GWHGAAZE030184AT4G34960.1Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein-0.58negative
GWHGAAZE014821AT4G36750.1Quinone reductase family protein-0.58negative
GWHGAAZE009277AT1G07420.2sterol 4-alpha-methyl-oxidase 2-1-0.58negative
GWHGAAZE012435AT1G14530.2Protein of unknown function (DUF1084)-0.58negative
GWHGAAZE008069AT3G42050.1vacuolar ATP synthase subunit H family protein-0.58negative
GWHGAAZE004231AT3G03960.1TCP-1/cpn60 chaperonin family protein-0.58negative
GWHGAAZE013631AT1G23360.1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein-0.58negative
GWHGAAZE017960AT2G42490.1Copper amine oxidase family protein-0.58negative
GWHGAAZE024148AT1G77060.1Phosphoenolpyruvate carboxylase family protein-0.58negative
GWHGAAZE024795AT2G46580.1Pyridoxamine 5'-phosphate oxidase family protein-0.58negative
GWHGAAZE026687AT2G39570.1ACT domain-containing protein-0.58negative
GWHGAAZE014780AT1G68430.1hypothetical protein;(source:Araport11)-0.58negative
GWHGAAZE004067-----0.58negative
GWHGAAZE007880AT4G39730.1Lipase/lipooxygenase, PLAT/LH2 family protein-0.58negative
GWHGAAZE025845AT3G18670.1Ankyrin repeat family protein-0.58negative
GWHGAAZE022758AT1G26610.1C2H2-like zinc finger protein-0.58negative
GWHGAAZE018103AT1G68390.1Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein-0.58negative
GWHGAAZE003224AT2G37730.1Protein of unknown function (DUF604)-0.58negative
GWHGAAZE013713AT1G67360.2Rubber elongation factor protein (REF)-0.58negative
GWHGAAZE019218AT1G31830.2Amino acid permease family protein-0.58negative
GWHGAAZE022036AT4G14420.1HR-like lesion-inducing protein-related-0.58negative
GWHGAAZE003467AT1G07390.2receptor like protein 1-0.58negative
GWHGAAZE021822AT5G43330.1Lactate/malate dehydrogenase family protein-0.58negative
GWHGAAZE028610AT5G25510.1Protein phosphatase 2A regulatory B subunit family protein-0.58negative
GWHGAAZE014563AT5G66870.1ASYMMETRIC LEAVES 2-like 1-0.57negative
GWHGAAZE022661AT1G25500.2Plasma-membrane choline transporter family protein-0.57negative
GWHGAAZE003392AT3G14172.1GPI-anchored adhesin-like protein;(source:Araport11)-0.57negative
GWHGAAZE033828AT4G01960.1transmembrane protein;(source:Araport11)-0.57negative
GWHGAAZE022653AT1G25500.2Plasma-membrane choline transporter family protein-0.57negative
GWHGAAZE027885AT5G46910.1Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein-0.57negative
GWHGAAZE004817AT1G61850.1phospholipases;galactolipases-0.57negative
GWHGAAZE008196AT1G80930.1MIF4G domain-containing protein / MA3 domain-containing protein-0.57negative
GWHGAAZE006396AT5G47020.1MraZ;(source:Araport11)-0.57negative
GWHGAAZE019970AT5G14240.1Thioredoxin superfamily protein-0.57negative
GWHGAAZE009447AT1G26910.1Ribosomal protein L16p/L10e family protein-0.57negative
GWHGAAZE000446AT5G48810.1cytochrome B5 isoform D-0.57negative
GWHGAAZE002594AT1G53490.1RING/U-box superfamily protein-0.57negative
GWHGAAZE003820AT5G52340.1exocyst subunit exo70 family protein A2-0.57negative
GWHGAAZE033294AT3G27470.2Protein of unknown function (DUF707)-0.57negative
GWHGAAZE000115AT1G71340.1PLC-like phosphodiesterases superfamily protein-0.57negative
GWHGAAZE006465AT5G47520.1RAB GTPase homolog A5A-0.57negative
GWHGAAZE002850AT1G05170.1Galactosyltransferase family protein-0.57negative
GWHGAAZE024520AT2G02790.1IQ-domain 29-0.57negative
GWHGAAZE017826AT1G74520.1HVA22 homologue A-0.57negative
GWHGAAZE003698AT4G27720.1Major facilitator superfamily protein-0.57negative
GWHGAAZE017793AT1G18700.3DNAJ heat shock N-terminal domain-containing protein-0.57negative
GWHGAAZE000851AT5G60050.1BTB/POZ domain-containing protein-0.57negative
GWHGAAZE005870AT1G32930.1Galactosyltransferase family protein-0.57negative
GWHGAAZE022497AT4G17720.1RNA-binding (RRM/RBD/RNP motifs) family protein-0.57negative
GWHGAAZE026846AT5G44280.1RING 1A-0.57negative
GWHGAAZE014899AT3G51040.3RTE1-homolog-0.57negative
GWHGAAZE016150AT1G22790.2Low affinity potassium transport system protein;(source:Araport11)-0.57negative
GWHGAAZE004463AT1G29300.1Plant protein of unknown function (DUF641)-0.57negative
GWHGAAZE014720AT3G49660.1Transducin/WD40 repeat-like superfamily protein-0.57negative
GWHGAAZE026672AT3G55430.1O-Glycosyl hydrolases family 17 protein-0.57negative
GWHGAAZE025733AT5G11700.1ephrin type-B receptor;(source:Araport11)-0.57negative
GWHGAAZE003700AT4G27690.1vacuolar protein sorting 26B-0.57negative
GWHGAAZE017566AT5G57970.2DNA glycosylase superfamily protein-0.57negative
GWHGAAZE015104AT1G65900.1plant/protein;(source:Araport11)-0.56negative
GWHGAAZE012487AT1G14830.1DYNAMIN-like 1C-0.56negative
GWHGAAZE013402AT1G26100.1Cytochrome b561/ferric reductase transmembrane protein family-0.56negative
GWHGAAZE005896AT1G01225.1NC domain-containing protein-related-0.56negative
GWHGAAZE018690AT3G54690.1Sugar isomerase (SIS) family protein-0.56negative
GWHGAAZE013184AT5G03250.1Phototropic-responsive NPH3 family protein-0.56negative
GWHGAAZE030539AT5G26360.1TCP-1/cpn60 chaperonin family protein-0.56negative
GWHGAAZE012498AT2G01630.1O-Glycosyl hydrolases family 17 protein-0.56negative
GWHGAAZE003611AT2G46170.1Reticulon family protein-0.56negative
GWHGAAZE016181AT1G71830.1somatic embryogenesis receptor-like kinase 1-0.56negative
GWHGAAZE006368AT2G35350.1poltergeist like 1-0.56negative
GWHGAAZE017219AT1G17260.1autoinhibited H(+)-ATPase isoform 10-0.56negative
GWHGAAZE026826AT5G60860.1RAB GTPase homolog A1F-0.56negative
GWHGAAZE002150AT5G53970.1Tyrosine transaminase family protein-0.56negative
GWHGAAZE031670AT3G52115.1gamma response gene 1-0.56negative
GWHGAAZE024916AT4G00570.1NAD-dependent malic enzyme 2-0.56negative
GWHGAAZE022237AT3G66658.2aldehyde dehydrogenase 22A1-0.56negative
GWHGAAZE021935AT3G24020.1Disease resistance-responsive (dirigent-like protein) family protein-0.56negative
GWHGAAZE007194AT3G56750.1plant/protein;(source:Araport11)-0.56negative
GWHGAAZE004182-----0.56negative
GWHGAAZE002887AT5G55230.1microtubule-associated proteins 65-1-0.56negative
GWHGAAZE004171AT5G04160.1Nucleotide-sugar transporter family protein-0.56negative
GWHGAAZE007844AT5G10360.1Ribosomal protein S6e-0.56negative
GWHGAAZE026553AT3G11110.1RING/U-box superfamily protein-0.56negative
GWHGAAZE008561AT5G12110.1Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6-0.56negative
GWHGAAZE007408AT5G66680.1dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein-0.56negative
GWHGAAZE012132-----0.56negative
GWHGAAZE021777AT1G04690.1potassium channel beta subunit 1-0.56negative
GWHGAAZE018128AT3G18050.1GPI-anchored protein;(source:Araport11)-0.56negative
GWHGAAZE000870AT5G60250.1zinc finger (C3HC4-type RING finger) family protein-0.56negative
GWHGAAZE011949AT4G14240.2CBS domain-containing protein with a domain of unknown function (DUF21)-0.56negative
GWHGAAZE009797AT4G09820.1basic helix-loop-helix (bHLH) DNA-binding superfamily protein-0.56negative
GWHGAAZE018756AT4G21790.1tobamovirus multiplication 1-0.56negative
GWHGAAZE014338AT4G39860.1hematological/neurological-like protein;(source:Araport11)-0.56negative
GWHGAAZE030369AT3G18215.1Protein of unknown function, DUF599-0.56negative
GWHGAAZE012574AT1G17970.1RING/U-box superfamily protein-0.56negative
GWHGAAZE014348AT4G08685.1Pollen Ole e 1 allergen and extensin family protein-0.56negative
GWHGAAZE033244AT5G40270.1HD domain-containing metal-dependent phosphohydrolase family protein-0.56negative
GWHGAAZE009741AT3G63400.2Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein-0.56negative
GWHGAAZE031419AT5G23990.1ferric reduction oxidase 5-0.56negative


Expression profiling, GSEA and motif analysis