LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE020097

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE020097

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE020097AT2G30490.1cinnamate-4-hydroxylase1positive
GWHGAAZE020055AT2G30490.1cinnamate-4-hydroxylase0.98positive
GWHGAAZE009153AT1G07900.1LOB domain-containing protein 10.97positive
GWHGAAZE012306AT5G49520.1WRKY DNA-binding protein 480.96positive
GWHGAAZE002565AT1G14130.12-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein0.96positive
GWHGAAZE006884AT1G30760.1FAD-binding Berberine family protein0.96positive
GWHGAAZE020665AT4G34920.1PLC-like phosphodiesterases superfamily protein0.96positive
GWHGAAZE020039----0.95positive
GWHGAAZE033156AT3G01420.1Peroxidase superfamily protein0.95positive
GWHGAAZE029436AT2G23610.1methyl esterase 30.95positive
GWHGAAZE018784AT5G64550.1loricrin-related0.95positive
GWHGAAZE007106----0.95positive
GWHGAAZE020118AT3G13050.1Major facilitator superfamily protein0.95positive
GWHGAAZE023261AT3G61040.2cytochrome P450, family 76, subfamily C, polypeptide 70.95positive
GWHGAAZE004410AT3G05950.1RmlC-like cupins superfamily protein0.95positive
GWHGAAZE004409AT3G05950.1RmlC-like cupins superfamily protein0.95positive
GWHGAAZE028871AT5G16080.1carboxyesterase 170.95positive
GWHGAAZE020137AT3G13050.1Major facilitator superfamily protein0.95positive
GWHGAAZE016514AT4G31950.1cytochrome P450, family 82, subfamily C, polypeptide 30.95positive
GWHGAAZE028809AT5G16080.1carboxyesterase 170.95positive
GWHGAAZE015473AT1G05200.2glutamate receptor 3.40.95positive
GWHGAAZE024517AT3G02645.1Plant protein of unknown function (DUF247)0.94positive
GWHGAAZE018243AT1G76490.1hydroxy methylglutaryl CoA reductase 10.94positive
GWHGAAZE018571AT4G35220.1Cyclase family protein0.94positive
GWHGAAZE017982AT3G48280.1cytochrome P450, family 71, subfamily A, polypeptide 250.94positive
GWHGAAZE004407AT3G05950.1RmlC-like cupins superfamily protein0.94positive
GWHGAAZE004460AT1G29280.1WRKY DNA-binding protein 650.93positive
GWHGAAZE021162AT3G23750.1Leucine-rich repeat protein kinase family protein0.93positive
GWHGAAZE004408AT3G05950.1RmlC-like cupins superfamily protein0.93positive
GWHGAAZE011029----0.93positive
GWHGAAZE012485AT1G68040.1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein0.93positive
GWHGAAZE025029----0.93positive
GWHGAAZE006039AT4G23420.2NAD(P)-binding Rossmann-fold superfamily protein0.93positive
GWHGAAZE011843AT1G47480.1alpha/beta-Hydrolases superfamily protein0.93positive
GWHGAAZE005372AT2G38320.1TRICHOME BIREFRINGENCE-LIKE 340.93positive
GWHGAAZE022721AT2G26710.1Cytochrome P450 superfamily protein0.93positive
GWHGAAZE022460AT1G59960.1NAD(P)-linked oxidoreductase superfamily protein0.93positive
GWHGAAZE011516AT5G36930.2Disease resistance protein (TIR-NBS-LRR class) family0.93positive
GWHGAAZE004386AT4G21740.1transmembrane protein;(source:Araport11)0.92positive
GWHGAAZE008405AT1G75800.1Pathogenesis-related thaumatin superfamily protein0.92positive
GWHGAAZE019863AT2G33060.1receptor like protein 270.92positive
GWHGAAZE011030AT3G26760.1NAD(P)-binding Rossmann-fold superfamily protein0.92positive
GWHGAAZE008967AT4G33790.1Jojoba acyl CoA reductase-related male sterility protein0.92positive
GWHGAAZE010459AT5G52390.1PAR1 protein0.92positive
GWHGAAZE021082AT4G08850.1Leucine-rich repeat receptor-like protein kinase family protein0.92positive
GWHGAAZE026574AT1G45616.1receptor like protein 60.92positive
GWHGAAZE033301AT5G63180.1Pectin lyase-like superfamily protein0.92positive
GWHGAAZE026364AT5G62180.1carboxyesterase 200.91positive
GWHGAAZE020411AT1G71400.1receptor like protein 120.91positive
GWHGAAZE007473AT5G66390.1Peroxidase superfamily protein0.91positive
GWHGAAZE021165AT3G23750.1Leucine-rich repeat protein kinase family protein0.91positive
GWHGAAZE015162AT1G09890.1Rhamnogalacturonate lyase family protein0.91positive
GWHGAAZE028932AT5G21090.1Leucine-rich repeat (LRR) family protein0.91positive
GWHGAAZE018129AT1G18140.1laccase 10.91positive
GWHGAAZE018565AT4G34131.1UDP-glucosyl transferase 73B30.91positive
GWHGAAZE019658AT4G34135.1UDP-glucosyltransferase 73B20.91positive
GWHGAAZE009090AT3G48195.1Phox (PX) domain-containing protein0.9positive
GWHGAAZE008775AT4G38830.1cysteine-rich RLK (RECEPTOR-like protein kinase) 260.9positive
GWHGAAZE012934AT5G58300.2Leucine-rich repeat protein kinase family protein0.9positive
GWHGAAZE020076AT3G26040.1HXXXD-type acyl-transferase family protein0.9positive
GWHGAAZE011842AT1G47480.1alpha/beta-Hydrolases superfamily protein0.9positive
GWHGAAZE031381AT2G45830.1downstream target of AGL15 20.9positive
GWHGAAZE026156AT2G29100.1glutamate receptor 2.90.9positive
GWHGAAZE024537AT3G02645.1Plant protein of unknown function (DUF247)0.9positive
GWHGAAZE029435AT2G23610.1methyl esterase 30.9positive
GWHGAAZE026155AT2G29120.1glutamate receptor 2.70.9positive
GWHGAAZE004966AT3G53720.1cation/H+ exchanger 200.9positive
GWHGAAZE000869AT1G07900.1LOB domain-containing protein 10.9positive
GWHGAAZE005883AT4G02290.1glycosyl hydrolase 9B130.9positive
GWHGAAZE008259AT5G06720.1peroxidase 20.9positive
GWHGAAZE009074AT5G57620.1myb domain protein 360.9positive
GWHGAAZE020080AT3G26040.1HXXXD-type acyl-transferase family protein0.9positive
GWHGAAZE029125AT3G51550.1Malectin/receptor-like protein kinase family protein0.89positive
GWHGAAZE012129AT3G21530.1DNAse I-like superfamily protein0.89positive
GWHGAAZE024518AT3G02645.1Plant protein of unknown function (DUF247)0.89positive
GWHGAAZE005509AT3G21420.12-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein0.89positive
GWHGAAZE023979AT3G16510.1Calcium-dependent lipid-binding (CaLB domain) family protein0.89positive
GWHGAAZE018564AT4G34131.1UDP-glucosyl transferase 73B30.89positive
GWHGAAZE005382AT2G38290.1ammonium transporter 20.89positive
GWHGAAZE021083AT1G35710.1Protein kinase family protein with leucine-rich repeat domain0.89positive
GWHGAAZE008973AT3G44550.1fatty acid reductase 50.89positive
GWHGAAZE012005AT4G03440.1Ankyrin repeat family protein0.89positive
GWHGAAZE010682AT1G60690.1NAD(P)-linked oxidoreductase superfamily protein0.89positive
GWHGAAZE020081AT3G26040.1HXXXD-type acyl-transferase family protein0.89positive
GWHGAAZE027521AT1G64160.1Disease resistance-responsive (dirigent-like protein) family protein0.89positive
GWHGAAZE017983AT1G10900.1Phosphatidylinositol-4-phosphate 5-kinase family protein0.89positive
GWHGAAZE026698AT2G37430.1C2H2 and C2HC zinc fingers superfamily protein0.89positive
GWHGAAZE001797AT4G02780.1Terpenoid cyclases/Protein prenyltransferases superfamily protein0.89positive
GWHGAAZE008750AT4G38830.1cysteine-rich RLK (RECEPTOR-like protein kinase) 260.89positive
GWHGAAZE000932AT1G08080.1alpha carbonic anhydrase 70.88positive
GWHGAAZE021007AT5G47650.1nudix hydrolase homolog 20.88positive
GWHGAAZE021547AT5G19040.1isopentenyltransferase 50.88positive
GWHGAAZE011247AT4G08850.1Leucine-rich repeat receptor-like protein kinase family protein0.88positive
GWHGAAZE008978AT1G74110.1cytochrome P450, family 78, subfamily A, polypeptide 100.88positive
GWHGAAZE007992AT3G18670.1Ankyrin repeat family protein0.88positive
GWHGAAZE029132AT1G55020.1lipoxygenase 10.88positive
GWHGAAZE000168AT4G13420.1high affinity K+ transporter 50.88positive
GWHGAAZE029513AT2G23610.1methyl esterase 30.88positive
GWHGAAZE021583AT1G76360.1Protein kinase superfamily protein0.88positive
GWHGAAZE026154AT2G29120.1glutamate receptor 2.70.88positive
GWHGAAZE010713AT3G22060.1Receptor-like protein kinase-related family protein0.88positive
GWHGAAZE024854AT2G46150.1Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family0.88positive
GWHGAAZE027356AT5G23810.1amino acid permease 70.88positive
GWHGAAZE015167AT4G39330.1cinnamyl alcohol dehydrogenase 90.88positive
GWHGAAZE023455AT4G37530.1Peroxidase superfamily protein0.88positive
GWHGAAZE010453AT5G52390.1PAR1 protein0.88positive
GWHGAAZE014289AT2G14095.1hypothetical protein;(source:Araport11)0.88positive
GWHGAAZE001916AT3G14690.1cytochrome P450, family 72, subfamily A, polypeptide 150.88positive
GWHGAAZE026544AT2G30130.1Lateral organ boundaries (LOB) domain family protein0.88positive
GWHGAAZE016901AT1G49230.1RING/U-box superfamily protein0.88positive
GWHGAAZE012105AT3G23230.1Integrase-type DNA-binding superfamily protein0.88positive
GWHGAAZE020077AT3G26040.1HXXXD-type acyl-transferase family protein0.88positive
GWHGAAZE010772AT1G55680.1Transducin/WD40 repeat-like superfamily protein0.88positive
GWHGAAZE023493AT5G19410.1ABC-2 type transporter family protein0.88positive
GWHGAAZE003722AT1G05260.1Peroxidase superfamily protein0.88positive
GWHGAAZE006755AT5G45670.1GDSL-like Lipase/Acylhydrolase superfamily protein0.88positive
GWHGAAZE023285AT3G61040.2cytochrome P450, family 76, subfamily C, polypeptide 70.88positive
GWHGAAZE010663AT1G60690.1NAD(P)-linked oxidoreductase superfamily protein0.87positive
GWHGAAZE001159AT1G22400.1UDP-Glycosyltransferase superfamily protein0.87positive
GWHGAAZE017017AT1G22340.1UDP-glucosyl transferase 85A70.87positive
GWHGAAZE008408AT1G75800.1Pathogenesis-related thaumatin superfamily protein0.87positive
GWHGAAZE003608AT2G46150.1Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family0.87positive
GWHGAAZE016908AT5G64700.1nodulin MtN21 /EamA-like transporter family protein0.87positive
GWHGAAZE024158AT1G77120.1alcohol dehydrogenase 10.87positive
GWHGAAZE020425AT2G34930.1disease resistance family protein / LRR family protein0.87positive
GWHGAAZE032483AT5G06850.1C2 calcium/lipid-binding plant phosphoribosyltransferase family protein0.87positive
GWHGAAZE007982AT2G19070.1spermidine hydroxycinnamoyl transferase0.87positive
GWHGAAZE002699AT5G20110.1Dynein light chain type 1 family protein0.87positive
GWHGAAZE016521AT2G23450.2Protein kinase superfamily protein0.87positive
GWHGAAZE001962AT5G51160.1Ankyrin repeat family protein0.86positive
GWHGAAZE029510AT2G23610.1methyl esterase 30.86positive
GWHGAAZE018470AT3G18830.1polyol/monosaccharide transporter 50.86positive
GWHGAAZE005329AT5G05340.1Peroxidase superfamily protein0.86positive
GWHGAAZE026695AT5G07990.1Cytochrome P450 superfamily protein0.86positive
GWHGAAZE025296AT3G27970.1Exonuclease family protein0.86positive
GWHGAAZE020218AT4G19050.1NB-ARC domain-containing disease resistance protein0.86positive
GWHGAAZE008974AT4G33790.1Jojoba acyl CoA reductase-related male sterility protein0.86positive
GWHGAAZE029297AT4G34135.1UDP-glucosyltransferase 73B20.86positive
GWHGAAZE011071AT2G32800.1protein kinase family protein0.86positive
GWHGAAZE006554AT4G27270.1Quinone reductase family protein0.86positive


Expression profiling, GSEA and motif analysis