LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE022490

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE022490

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE022490AT1G34300.1lectin protein kinase family protein1positive
GWHGAAZE024837AT5G05620.1gamma-tubulin complex protein 2-0.67negative
GWHGAAZE015643AT1G71900.1Protein of unknown function (DUF803)-0.67negative
GWHGAAZE018597AT2G18990.1thioredoxin domain-containing protein 9 homolog-0.64negative
GWHGAAZE025298AT3G27930.1Encodes a novel plant-specific beta-barrel protein that likely plays a role in the transport of metabolites and in leaf senescence.-0.64negative
GWHGAAZE018756AT4G21790.1tobamovirus multiplication 1-0.64negative
GWHGAAZE013713AT1G67360.2Rubber elongation factor protein (REF)-0.64negative
GWHGAAZE009310AT5G58970.1uncoupling protein 2-0.63negative
GWHGAAZE024619AT4G30810.1serine carboxypeptidase-like 29-0.63negative
GWHGAAZE000795AT5G59740.1UDP-N-acetylglucosamine (UAA) transporter family-0.62negative
GWHGAAZE033828AT4G01960.1transmembrane protein;(source:Araport11)-0.62negative
GWHGAAZE008196AT1G80930.1MIF4G domain-containing protein / MA3 domain-containing protein-0.62negative
GWHGAAZE032548AT3G14460.1LRR and NB-ARC domains-containing disease resistance protein-0.62negative
GWHGAAZE016816AT2G19220.1Myb/SANT-like DNA-binding domain protein;(source:Araport11)-0.62negative
GWHGAAZE007408AT5G66680.1dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein-0.62negative
GWHGAAZE025465AT1G08660.1MALE GAMETOPHYTE DEFECTIVE 2-0.62negative
GWHGAAZE019218AT1G31830.2Amino acid permease family protein-0.62negative
GWHGAAZE014956AT4G35950.1RAC-like 6-0.62negative
GWHGAAZE030792AT5G23720.1dual specificity protein phosphatase family protein-0.62negative
GWHGAAZE007307AT4G37820.1transmembrane protein;(source:Araport11)-0.61negative
GWHGAAZE027885AT5G46910.1Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein-0.61negative
GWHGAAZE020444AT1G72270.2Encodes IDAP1. Acts together with IDAP2 and IDM1 to regulate active DNA demethylation.-0.61negative
GWHGAAZE026541AT2G40316.1autophagy-like protein;(source:Araport11)-0.61negative
GWHGAAZE033615AT5G20590.1TRICHOME BIREFRINGENCE-LIKE 5-0.61negative
GWHGAAZE012435AT1G14530.2Protein of unknown function (DUF1084)-0.61negative
GWHGAAZE008069AT3G42050.1vacuolar ATP synthase subunit H family protein-0.61negative
GWHGAAZE003820AT5G52340.1exocyst subunit exo70 family protein A2-0.61negative
GWHGAAZE002850AT1G05170.1Galactosyltransferase family protein-0.61negative
GWHGAAZE013465AT2G03510.1SPFH/Band 7/PHB domain-containing membrane-associated protein family-0.61negative
GWHGAAZE002693AT4G04910.1AAA-type ATPase family protein-0.61negative
GWHGAAZE014438AT5G60980.1Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-0.61negative
GWHGAAZE014464AT5G15740.1O-fucosyltransferase family protein-0.61negative
GWHGAAZE000799AT2G39390.1Ribosomal L29 family protein -0.61negative
GWHGAAZE028610AT5G25510.1Protein phosphatase 2A regulatory B subunit family protein-0.61negative
GWHGAAZE019976AT3G10700.1galacturonic acid kinase-0.6negative
GWHGAAZE024644AT2G24765.1ADP-ribosylation factor 3-0.6negative
GWHGAAZE024497AT5G34850.1purple acid phosphatase 26-0.6negative
GWHGAAZE026917AT2G16030.1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein-0.6negative
GWHGAAZE011976AT1G55750.1BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)-0.6negative
GWHGAAZE031007AT1G73020.2anoctamin-like protein;(source:Araport11)-0.6negative
GWHGAAZE017400AT1G79820.2Major facilitator superfamily protein-0.6negative
GWHGAAZE030082AT4G39080.1vacuolar proton ATPase A3-0.6negative
GWHGAAZE017572AT1G80860.2phospholipid N-methyltransferase-0.6negative
GWHGAAZE002150AT5G53970.1Tyrosine transaminase family protein-0.6negative
GWHGAAZE013601AT1G23820.1spermidine synthase 1-0.6negative
GWHGAAZE006465AT5G47520.1RAB GTPase homolog A5A-0.6negative
GWHGAAZE007435AT5G49560.1Putative methyltransferase family protein-0.6negative
GWHGAAZE031367AT4G00570.1NAD-dependent malic enzyme 2-0.6negative
GWHGAAZE006229AT4G16510.1YbaK/aminoacyl-tRNA synthetase-associated domain-0.6negative
GWHGAAZE016687AT1G42960.1expressed protein localized to the inner membrane of the chloroplast.-0.6negative
GWHGAAZE012737AT5G24170.1Got1/Sft2-like vescicle transport protein family-0.6negative
GWHGAAZE008194AT1G80930.1MIF4G domain-containing protein / MA3 domain-containing protein-0.6negative
GWHGAAZE017209AT3G13580.3Ribosomal protein L30/L7 family protein-0.6negative
GWHGAAZE004212AT3G58060.1Cation efflux family protein-0.6negative
GWHGAAZE008519AT2G26810.2Putative methyltransferase family protein-0.6negative
GWHGAAZE014563AT5G66870.1ASYMMETRIC LEAVES 2-like 1-0.59negative
GWHGAAZE005179AT1G54650.2Methyltransferase family protein-0.59negative
GWHGAAZE020899AT2G43795.2corepressor;(source:Araport11)-0.59negative
GWHGAAZE004537AT3G58130.2N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein-0.59negative
GWHGAAZE027246AT5G54850.1hexon;(source:Araport11)-0.59negative
GWHGAAZE033469AT3G59890.1Dihydrodipicolinate reductase, bacterial/plant-0.59negative
GWHGAAZE023412AT5G67270.1end binding protein 1C-0.59negative
GWHGAAZE006396AT5G47020.1MraZ;(source:Araport11)-0.59negative
GWHGAAZE029418AT4G02080.1secretion-associated RAS super family 2-0.59negative
GWHGAAZE015890AT1G18340.1basal transcription factor complex subunit-related-0.59negative
GWHGAAZE000115AT1G71340.1PLC-like phosphodiesterases superfamily protein-0.59negative
GWHGAAZE032728AT2G22490.1Cyclin D2;1-0.59negative
GWHGAAZE024520AT2G02790.1IQ-domain 29-0.59negative
GWHGAAZE030500AT1G60780.1Clathrin adaptor complexes medium subunit family protein-0.59negative
GWHGAAZE000875AT1G07910.2RNAligase-0.59negative
GWHGAAZE029993AT2G15900.1Phox-associated domain;Phox-like;Sorting nexin, C-terminal-0.59negative
GWHGAAZE000033AT3G17430.1Nucleotide-sugar transporter family protein-0.58negative
GWHGAAZE030757AT5G63510.2gamma carbonic anhydrase like 1-0.58negative
GWHGAAZE026268AT5G52650.1RNA binding Plectin/S10 domain-containing protein-0.58negative
GWHGAAZE013884AT3G25940.1TFIIB zinc-binding protein-0.58negative
GWHGAAZE008861AT5G22030.2ubiquitin-specific protease 8-0.58negative
GWHGAAZE016190AT1G36240.1Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein-0.58negative
GWHGAAZE006943AT1G31280.1Argonaute family protein-0.58negative
GWHGAAZE033855AT3G62560.1Ras-related small GTP-binding family protein-0.58negative
GWHGAAZE008195AT1G80930.1MIF4G domain-containing protein / MA3 domain-containing protein-0.58negative
GWHGAAZE027273AT5G42570.1B-cell receptor-associated 31-like-0.58negative
GWHGAAZE003559AT3G53740.4Ribosomal protein L36e family protein-0.58negative
GWHGAAZE007246-----0.58negative
GWHGAAZE013483AT2G03350.1Protein of unknown function, DUF538-0.58negative
GWHGAAZE015891AT1G18340.1basal transcription factor complex subunit-related-0.58negative
GWHGAAZE012420AT3G19850.1Phototropic-responsive NPH3 family protein-0.58negative
GWHGAAZE021531AT1G74050.1Ribosomal protein L6 family protein-0.58negative
GWHGAAZE030401AT5G38690.1Zinc-finger domain of monoamine-oxidase A repressor R1 protein-0.58negative
GWHGAAZE025396-----0.58negative
GWHGAAZE003228AT2G39750.1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein-0.58negative
GWHGAAZE027161AT4G27500.1proton pump interactor 1-0.58negative
GWHGAAZE017627AT5G13300.1ARF GTPase-activating protein-0.58negative
GWHGAAZE026067AT3G48930.1Nucleic acid-binding, OB-fold-like protein-0.58negative
GWHGAAZE027427AT5G32470.1Haem oxygenase-like, multi-helical-0.58negative
GWHGAAZE022497AT4G17720.1RNA-binding (RRM/RBD/RNP motifs) family protein-0.58negative
GWHGAAZE003445AT1G76340.1golgi nucleotide sugar transporter 3-0.58negative
GWHGAAZE026100AT5G10840.1Endomembrane protein 70 protein family-0.58negative
GWHGAAZE028439AT4G32830.1ataurora1-0.58negative
GWHGAAZE002328AT2G32380.1Transmembrane protein 97, predicted-0.58negative
GWHGAAZE016038AT5G52560.1UDP-sugar pyrophosphorylase-0.58negative
GWHGAAZE016104AT1G21370.2transmembrane protein;(source:Araport11)-0.58negative
GWHGAAZE031827AT3G07940.1Calcium-dependent ARF-type GTPase activating protein family-0.58negative
GWHGAAZE022298AT3G17440.1novel plant snare 13-0.58negative
GWHGAAZE013402AT1G26100.1Cytochrome b561/ferric reductase transmembrane protein family-0.57negative
GWHGAAZE019343AT3G05560.3Ribosomal L22e protein family-0.57negative
GWHGAAZE000447AT5G48760.2Ribosomal protein L13 family protein-0.57negative
GWHGAAZE016680AT1G20760.1Calcium-binding EF hand family protein-0.57negative
GWHGAAZE027037AT4G26550.1Got1/Sft2-like vescicle transport protein family-0.57negative
GWHGAAZE020919AT3G59800.1stress response protein;(source:Araport11)-0.57negative
GWHGAAZE004622AT4G18460.1D-Tyr-tRNA(Tyr) deacylase family protein-0.57negative
GWHGAAZE031396AT2G37600.2Ribosomal protein L36e family protein-0.57negative
GWHGAAZE033197AT5G15050.1Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein-0.57negative
GWHGAAZE027344AT5G55950.1Nucleotide/sugar transporter family protein-0.57negative
GWHGAAZE013332AT2G36670.2Eukaryotic aspartyl protease family protein-0.57negative
GWHGAAZE007183AT3G12600.1nudix hydrolase homolog 16-0.57negative
GWHGAAZE004118AT3G10200.1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein-0.57negative
GWHGAAZE004182-----0.57negative
GWHGAAZE032391AT2G44060.2Late embryogenesis abundant protein, group 2-0.57negative
GWHGAAZE016316AT4G24580.1Rho GTPase activation protein (RhoGAP) with PH domain-0.57negative
GWHGAAZE029551AT5G35560.1DENN (AEX-3) domain-containing protein-0.57negative
GWHGAAZE031322AT3G60860.1SEC7-like guanine nucleotide exchange family protein-0.57negative
GWHGAAZE015109AT3G03220.1expansin A13-0.57negative
GWHGAAZE025814AT5G12040.1Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein-0.57negative
GWHGAAZE009216AT5G59840.1Ras-related small GTP-binding family protein-0.57negative
GWHGAAZE017499AT5G62200.1Embryo-specific protein 3, (ATS3)-0.57negative
GWHGAAZE000726AT5G59250.1Major facilitator superfamily protein-0.57negative
GWHGAAZE023787AT5G11980.1conserved oligomeric Golgi complex component-related / COG complex component-related-0.57negative
GWHGAAZE030197AT4G35070.1SBP (S-ribonuclease binding protein) family protein-0.57negative
GWHGAAZE024795AT2G46580.1Pyridoxamine 5'-phosphate oxidase family protein-0.57negative
GWHGAAZE021571AT3G56750.1plant/protein;(source:Araport11)-0.57negative
GWHGAAZE005870AT1G32930.1Galactosyltransferase family protein-0.57negative
GWHGAAZE007880AT4G39730.1Lipase/lipooxygenase, PLAT/LH2 family protein-0.57negative
GWHGAAZE023473AT3G49890.1hypothetical protein;(source:Araport11)-0.57negative
GWHGAAZE014074AT4G11800.1Calcineurin-like metallo-phosphoesterase superfamily protein-0.57negative
GWHGAAZE006890AT4G20760.1NAD(P)-binding Rossmann-fold superfamily protein-0.57negative
GWHGAAZE004424AT5G19480.2mediator of RNA polymerase II transcription subunit;(source:Araport11)-0.57negative
GWHGAAZE014583AT4G37020.1initiation factor 4A-like protein;(source:Araport11)-0.57negative
GWHGAAZE016567AT2G16370.1thymidylate synthase 1-0.57negative
GWHGAAZE013337AT4G14965.1membrane-associated progesterone binding protein 4-0.57negative
GWHGAAZE009201AT5G59740.1UDP-N-acetylglucosamine (UAA) transporter family-0.57negative
GWHGAAZE015426AT2G19930.1RNA-dependent RNA polymerase family protein-0.57negative
GWHGAAZE015102AT4G02280.1sucrose synthase 3-0.57negative
GWHGAAZE026319AT3G53020.1Ribosomal protein L24e family protein-0.57negative
GWHGAAZE015104AT1G65900.1plant/protein;(source:Araport11)-0.56negative
GWHGAAZE032044AT1G22882.1Galactose-binding protein-0.56negative
GWHGAAZE012648-----0.56negative
GWHGAAZE017207AT3G21160.1alpha-mannosidase 2-0.56negative
GWHGAAZE013184AT5G03250.1Phototropic-responsive NPH3 family protein-0.56negative
GWHGAAZE025828AT2G28230.1TATA-binding related factor (TRF) of subunit 20 of Mediator complex-0.56negative
GWHGAAZE023109AT5G13290.2Protein kinase superfamily protein-0.56negative
GWHGAAZE007062AT3G12160.1RAB GTPase homolog A4D-0.56negative
GWHGAAZE013139AT3G09560.3Lipin family protein-0.56negative
GWHGAAZE000928AT5G04250.2Cysteine proteinases superfamily protein-0.56negative
GWHGAAZE029247AT3G05560.3Ribosomal L22e protein family-0.56negative
GWHGAAZE031439AT4G01240.1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein-0.56negative
GWHGAAZE031670AT3G52115.1gamma response gene 1-0.56negative
GWHGAAZE003375AT1G61670.1Lung seven transmembrane receptor family protein-0.56negative
GWHGAAZE018714AT1G58120.1hypothetical protein;(source:Araport11)-0.56negative
GWHGAAZE002335AT2G32380.1Transmembrane protein 97, predicted-0.56negative
GWHGAAZE021549AT5G19050.1alpha/beta-Hydrolases superfamily protein-0.56negative
GWHGAAZE015614AT1G34470.1Protein of unknown function (DUF803)-0.56negative
GWHGAAZE007694AT2G17270.1phosphate transporter 3;3-0.56negative
GWHGAAZE003173AT2G39460.2ribosomal protein L23AA-0.56negative
GWHGAAZE004171AT5G04160.1Nucleotide-sugar transporter family protein-0.56negative
GWHGAAZE013166AT5G02960.1Ribosomal protein S12/S23 family protein-0.56negative
GWHGAAZE007844AT5G10360.1Ribosomal protein S6e-0.56negative
GWHGAAZE031173AT3G20240.1Mitochondrial substrate carrier family protein-0.56negative
GWHGAAZE009959AT3G62390.1TRICHOME BIREFRINGENCE-LIKE 6-0.56negative
GWHGAAZE000448AT3G24840.1Sec14p-like phosphatidylinositol transfer family protein-0.56negative
GWHGAAZE014759AT1G60640.3stress response protein;(source:Araport11)-0.56negative
GWHGAAZE009732AT2G38840.1Guanylate-binding family protein-0.56negative
GWHGAAZE030623AT1G26850.2S-adenosyl-L-methionine-dependent methyltransferases superfamily protein-0.56negative
GWHGAAZE026519AT3G56230.1BTB/POZ domain-containing protein-0.56negative
GWHGAAZE013499AT1G14060.1GCK domain-containing protein-0.56negative
GWHGAAZE029112AT3G17380.1TRAF-like family protein-0.56negative
GWHGAAZE024148AT1G77060.1Phosphoenolpyruvate carboxylase family protein-0.56negative
GWHGAAZE014658AT4G37630.2cyclin d5;1-0.56negative
GWHGAAZE000229AT1G03260.1SNARE associated Golgi protein family-0.56negative
GWHGAAZE007825AT5G65420.1CYCLIN D4;1-0.56negative
GWHGAAZE025386AT2G35880.1TPX2 (targeting protein for Xklp2) protein family-0.56negative
GWHGAAZE012133AT5G18900.12-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein-0.56negative
GWHGAAZE025039AT4G31810.1ATP-dependent caseinolytic (Clp) protease/crotonase family protein-0.56negative
GWHGAAZE022758AT1G26610.1C2H2-like zinc finger protein-0.56negative
GWHGAAZE003603AT1G51160.2SNARE-like superfamily protein-0.56negative
GWHGAAZE012773-----0.56negative
GWHGAAZE019219AT1G31830.1Amino acid permease family protein-0.56negative
GWHGAAZE031523AT4G22290.1Ubiquitin-specific protease family C19-related protein-0.56negative
GWHGAAZE015295AT4G29680.1Alkaline-phosphatase-like family protein-0.56negative
GWHGAAZE029922AT1G78160.1pumilio 7-0.56negative
GWHGAAZE002858AT4G26910.1Dihydrolipoamide succinyltransferase-0.56negative


Expression profiling, GSEA and motif analysis