Gene details

Annotation of co-expression genes

PH01000041G1140's details annotation

1.Annotation

ICBR annotation: RNA-dependent RNA polymerase, putative, expressed

Blast result AT4G11130 : 0.00E+00
Blast annotation: RNA-dependent RNA polymerase 2

2.Location

Scaffold: PH01000041
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000163	SET Transcription_Regulator(from iTAK) histone_methylation histone_lysine_methylation nucleus, RNA-directed RNA polymerase activity, zinc ion binding, histone_binding histone-lysine N-methyltransferase activity,
coexpression network	CFinderM000236	NAK (from iTAK) STAT Transcription_Regulator(from PlantTFDB) Glycine,_serine_and_threonine_metabolism magnesium_ion_transport TKL-Pl-5 (from iTAK) magnesium_ion_transmembrane_transporter_activity
coexpression network	CFinderM001521	Lipoic_acid_metabolism NAK (from iTAK) AP2/ERF-AP2 Transcription_Regulator(from iTAK) chloroplast, AP2 Transcription_Regulator(from PlantTFDB) lipoate biosynthetic process, RNA-directed RNA polymerase activity, lipoate synthase activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003968	RNA-directed RNA polymerase activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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