Gene details

Annotation of co-expression genes

PH01000045G1370's details annotation

1.Annotation

ICBR annotation: expressed_protein

Blast result AT5G45410 : 4.20E-89
Blast annotation: -

2.Location

Scaffold: PH01000045
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001429	negative_regulation_of_transcription,_DNA-templated FMN binding,
coexpression network	CFinderM001585	bZIP Transcription_Regulator(from PlantTFDB)
coexpression network	CFinderM001623	Ribosome_biogenesis_in_eukaryotes ribosome biogenesis, GTP binding,
coexpression network	CFinderM001730	Alanine,_aspartate_and_glutamate_metabolism TKL-Pl-2 (from iTAK) carbamoyl_phosphate_biosynthetic_process glutamine_catabolic_process clathrin_coat clathrin_coat_assembly Pyrimidine_metabolism bZIP Transcription_Regulator(from PlantTFDB)
coexpression network	CFinderM001780	S-adenosylmethionine_biosynthetic_process Cysteine_and_methionine_metabolism bZIP Transcription_Regulator(from PlantTFDB) methionine adenosyltransferase activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
null	null	null	null

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
null	null

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.