Gene details

Annotation of co-expression genes

PH01000218G1020's details annotation

1.Annotation

ICBR annotation: transcription initiation factor, putative, expressed

Blast result AT5G43130 : 3.70E-70
Blast annotation: TBP-associated factor 4

2.Location

Scaffold: PH01000218
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000534	CMGC_GSK (from iTAK) transcription factor TFIID complex, intracellular, Basal_transcription_factors Phagosome
coexpression network	CFinderM001570	cis-Golgi network, transcription factor TFIID complex, Basal_transcription_factors

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Basal transcription factors	transcription initiation factor TFIID subunit 4	ko03022	K03129

10.Gene Ontology

GO Accession	GO Annotation
GO:0005669	transcription factor TFIID complex
GO:0006352	DNA-dependent transcription, initiation
GO:0046982	protein heterodimerization activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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