CFinderM000534's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
CMGC_GSK (from iTAK)0.003931966GFam
transcription factor TFIID complex,0.007868357GO:0005669
intracellular,0.015136468GO:0005622
Basal_transcription_factors0.030066048KEGG
Phagosome0.036697844KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000067G1430RING/FYVE/PHD zinc finger superfamily proteinAT1G32810 (6.50E-86)
PH01000218G1020TBP-associated factor 4AT5G43130 (3.70E-70)
PH01000541G0730Ras-related small GTP-binding family proteinAT2G47170 (2.00E-100)
PH01000584G0630SHAGGY-related protein kinase dZetaAT2G30980 (0.00E+00)
PH01000918G0400actin-11AT3G12110 (0.00E+00)
PH01001119G0320Protein of unknown function (DUF2361)AT1G04230 (1.60E-37)
PH01001542G0180suppressor of abi3-5AT3G54230 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000343details
CFinderM000505Phagosome
regulation of actin filament polymerization,
cytoskeleton,
GRAS Transcription_Regulator(from PlantTFDB)
Rho GDP-dissociation inhibitor activity,
details
CFinderM000623intracellular,
Ribosome
translation,
structural constituent of ribosome,
HB-other Transcription_Regulator(from PlantTFDB)
details
CFinderM000946SWI/SNF-BAF60b Transcription_Regulator(from iTAK)
histone modification,
C3H Transcription_Regulator(from PlantTFDB)
actin cytoskeleton organization,
transcription initiation, DNA-dependent,
mitochondrial respiratory chain,
sister_chromatid_cohesion
chromosome condensation,
CMGC_MAPK (from iTAK)
actin binding,
chromosome organization,
ribulose-phosphate 3-epimerase activity,
details
CFinderM001570cis-Golgi network,
transcription factor TFIID complex,
Basal_transcription_factors
details
CFinderM001606LIM Transcription_Regulator(from iTAK)
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
proton-transporting two-sector ATPase complex, catalytic domain,
proton-transporting ATP synthase complex, catalytic core F(1),
ATP biosynthetic process,
ATP metabolic process,
ATP_catabolic_process
actin cytoskeleton organization,
proton transport,
ATP synthesis coupled proton transport,
ATP hydrolysis coupled proton transport,
Phagosome
Oxidative_phosphorylation
details
CFinderM001786lipid metabolic process,
details
CFinderM001804details

4.Expression profilings