CFinderM000505's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Phagosome0.000187034KEGG
regulation of actin filament polymerization,0.002997141GO:0030833
cytoskeleton,0.016280409GO:0005856
GRAS Transcription_Regulator(from PlantTFDB)0.01680106GFam
Rho GDP-dissociation inhibitor activity,0.019288925GO:0005094

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000356G0990actin-related protein C1AAT2G30910 (1.70E-90)
PH01000781G0080actin 3AT3G53750 (0.00E+00)
PH01000918G0400actin-11AT3G12110 (0.00E+00)
PH01000948G0110Zinc finger C-x8-C-x5-C-x3-H type family proteinAT1G21580 (1.00E-121)
PH01001119G0320Protein of unknown function (DUF2361)AT1G04230 (1.60E-37)
PH01003167G0070Immunoglobulin E-set superfamily proteinAT3G07880 (4.40E-54)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000173response to oxidative stress,
peroxidase activity,
heme binding,
oxidation-reduction process,
Phenylpropanoid_biosynthesis
Phenylalanine_metabolism
Methane_metabolism
details
CFinderM000175Ribosome
translation,
Ribosome
small ribosomal subunit,
structural constituent of ribosome,
intracellular,
eukaryotic translation elongation factor 1 complex,
translational elongation,
translation elongation factor activity,
details
CFinderM000519LIM Transcription_Regulator(from iTAK)
mitochondrial inner membrane,
details
CFinderM000534CMGC_GSK (from iTAK)
transcription factor TFIID complex,
intracellular,
Basal_transcription_factors
Phagosome
details
CFinderM000660Phagosome
mitochondrial inner membrane,
GTnc GlycosylTransferases
details
CFinderM000910translation,
phosphopyruvate hydratase complex,
Ribosome
intracellular,
small ribosomal subunit,
phosphopyruvate hydratase activity,
structural constituent of ribosome,
glycolysis,
Methane_metabolism
RNA_degradation
Glycolysis_/_Gluconeogenesis
details
CFinderM000946SWI/SNF-BAF60b Transcription_Regulator(from iTAK)
histone modification,
C3H Transcription_Regulator(from PlantTFDB)
actin cytoskeleton organization,
transcription initiation, DNA-dependent,
mitochondrial respiratory chain,
sister_chromatid_cohesion
chromosome condensation,
CMGC_MAPK (from iTAK)
actin binding,
chromosome organization,
ribulose-phosphate 3-epimerase activity,
details
CFinderM001233Ribosome
translation,
structural constituent of ribosome,
intracellular,
Ribosome
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o),
ATP synthesis coupled proton transport,
small ribosomal subunit,
rRNA binding,
hydrogen ion transmembrane transporter activity,
Oxidative_phosphorylation
details
CFinderM001606LIM Transcription_Regulator(from iTAK)
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
proton-transporting two-sector ATPase complex, catalytic domain,
proton-transporting ATP synthase complex, catalytic core F(1),
ATP biosynthetic process,
ATP metabolic process,
ATP_catabolic_process
actin cytoskeleton organization,
proton transport,
ATP synthesis coupled proton transport,
ATP hydrolysis coupled proton transport,
Phagosome
Oxidative_phosphorylation
details
CFinderM001804details

4.Expression profilings