|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | LIM Transcription_Regulator(from iTAK) | 0.001124807 | GFam | | mitochondrial inner membrane, | 0.003745256 | GO:0005743 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000173G1220 | phosphate transporter 3;1 | AT5G14040 (2.00E-145) | | PH01000948G0110 | Zinc finger C-x8-C-x5-C-x3-H type family protein | AT1G21580 (1.00E-121) | | PH01001115G0660 | GATA type zinc finger transcription factor family protein | AT2G39900 (8.20E-85) | | PH01001158G0320 | Homeodomain-like superfamily protein | AT1G64570 (4.00E-136) | | PH01002049G0320 | PLAC8 family protein | AT2G45010 (4.60E-98) | | PH01002754G0140 | ADP/ATP carrier 3 | AT4G28390 (3.00E-151) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000038 | bHLH Transcription_Regulator(from PlantTFDB)
| details | | CFinderM000041 | Oxidative_phosphorylation
respiratory electron transport chain,
mitochondrial inner membrane,
| details | | CFinderM000140 | Ribosome
translation,
Ribosome
structural constituent of ribosome,
intracellular,
| details | | CFinderM000149 | SET Transcription_Regulator(from iTAK)
DDT Transcription_Regulator(from iTAK)
GTnc GlycosylTransferases
mitochondrial inner membrane,
exocyst,
| details | | CFinderM000166 | Ribosome
translation,
Ribosome
structural constituent of ribosome,
intracellular,
mitochondrial envelope,
cytochrome-c oxidase activity,
polysaccharide_binding
ubiquitin thiolesterase activity,
Oxidative_phosphorylation
ubiquitin-dependent protein catabolic process,
| details | | CFinderM000173 | response to oxidative stress,
peroxidase activity,
heme binding,
oxidation-reduction process,
Phenylpropanoid_biosynthesis
Phenylalanine_metabolism
Methane_metabolism
| details | | CFinderM000175 | Ribosome
translation,
Ribosome
small ribosomal subunit,
structural constituent of ribosome,
intracellular,
eukaryotic translation elongation factor 1 complex,
translational elongation,
translation elongation factor activity,
| details | | CFinderM000226 | DDT Transcription_Regulator(from iTAK)
glycolysis,
fructose-bisphosphate aldolase activity,
Methane_metabolism
Carbon_fixation_in_photosynthetic_organisms
Pentose_phosphate_pathway
Fructose_and_mannose_metabolism
Glycolysis_/_Gluconeogenesis
| details | | CFinderM000505 | Phagosome
regulation of actin filament polymerization,
cytoskeleton,
GRAS Transcription_Regulator(from PlantTFDB)
Rho GDP-dissociation inhibitor activity,
| details | | CFinderM000660 | Phagosome
mitochondrial inner membrane,
GTnc GlycosylTransferases
| details | | CFinderM000910 | translation,
phosphopyruvate hydratase complex,
Ribosome
intracellular,
small ribosomal subunit,
phosphopyruvate hydratase activity,
structural constituent of ribosome,
glycolysis,
Methane_metabolism
RNA_degradation
Glycolysis_/_Gluconeogenesis
| details | | CFinderM001233 | Ribosome
translation,
structural constituent of ribosome,
intracellular,
Ribosome
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o),
ATP synthesis coupled proton transport,
small ribosomal subunit,
rRNA binding,
hydrogen ion transmembrane transporter activity,
Oxidative_phosphorylation
| details | | CFinderM001606 | LIM Transcription_Regulator(from iTAK)
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
proton-transporting two-sector ATPase complex, catalytic domain,
proton-transporting ATP synthase complex, catalytic core F(1),
ATP biosynthetic process,
ATP metabolic process,
ATP_catabolic_process
actin cytoskeleton organization,
proton transport,
ATP synthesis coupled proton transport,
ATP hydrolysis coupled proton transport,
Phagosome
Oxidative_phosphorylation
| details |
4.Expression profilings |
