CFinderM000910's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
translation,0.006295177GO:0006412
phosphopyruvate hydratase complex,0.007808715GO:0000015
Ribosome0.007808715KEGG
intracellular,0.015246462GO:0005622
small ribosomal subunit,0.015246462GO:0015935
phosphopyruvate hydratase activity,0.015423185GO:0004634
structural constituent of ribosome,0.015423185GO:0003735
glycolysis,0.023755064GO:0006096
Methane_metabolism0.043765654KEGG
RNA_degradation0.043765654KEGG
Glycolysis_/_Gluconeogenesis0.043765654KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000064G0940Ribosomal protein S6eAT5G10360 (4.00E-104)
PH01000464G0670Ribosomal protein S12/S23 family proteinAT5G02960 (1.30E-75)
PH01000948G0110Zinc finger C-x8-C-x5-C-x3-H type family proteinAT1G21580 (1.00E-121)
PH01001076G0500ENHANCED DOWNY MILDEW 2AT5G55390 (4.00E-153)
PH01001158G0320Homeodomain-like superfamily proteinAT1G64570 (4.00E-136)
PH01004640G0020enolase 1AT1G74030 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000038bHLH Transcription_Regulator(from PlantTFDB)
details
CFinderM000041Oxidative_phosphorylation
respiratory electron transport chain,
mitochondrial inner membrane,
details
CFinderM000140Ribosome
translation,
Ribosome
structural constituent of ribosome,
intracellular,
details
CFinderM000166Ribosome
translation,
Ribosome
structural constituent of ribosome,
intracellular,
mitochondrial envelope,
cytochrome-c oxidase activity,
polysaccharide_binding
ubiquitin thiolesterase activity,
Oxidative_phosphorylation
ubiquitin-dependent protein catabolic process,
details
CFinderM000173response to oxidative stress,
peroxidase activity,
heme binding,
oxidation-reduction process,
Phenylpropanoid_biosynthesis
Phenylalanine_metabolism
Methane_metabolism
details
CFinderM000175Ribosome
translation,
Ribosome
small ribosomal subunit,
structural constituent of ribosome,
intracellular,
eukaryotic translation elongation factor 1 complex,
translational elongation,
translation elongation factor activity,
details
CFinderM000256signal recognition particle,
proton-transporting two-sector ATPase complex, proton-transporting domain,
details
CFinderM000505Phagosome
regulation of actin filament polymerization,
cytoskeleton,
GRAS Transcription_Regulator(from PlantTFDB)
Rho GDP-dissociation inhibitor activity,
details
CFinderM000519LIM Transcription_Regulator(from iTAK)
mitochondrial inner membrane,
details
CFinderM000537Ribosome
eukaryotic translation initiation factor 3 complex,
details
CFinderM001233Ribosome
translation,
structural constituent of ribosome,
intracellular,
Ribosome
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o),
ATP synthesis coupled proton transport,
small ribosomal subunit,
rRNA binding,
hydrogen ion transmembrane transporter activity,
Oxidative_phosphorylation
details
CFinderM001606LIM Transcription_Regulator(from iTAK)
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
proton-transporting two-sector ATPase complex, catalytic domain,
proton-transporting ATP synthase complex, catalytic core F(1),
ATP biosynthetic process,
ATP metabolic process,
ATP_catabolic_process
actin cytoskeleton organization,
proton transport,
ATP synthesis coupled proton transport,
ATP hydrolysis coupled proton transport,
Phagosome
Oxidative_phosphorylation
details
CFinderM001649CMGC_CDK-PITSLRE (from iTAK)
LUG Transcription_Regulator(from iTAK)
sphingolipid metabolic process,
glucosylceramidase activity,
details

4.Expression profilings