PH01000256G0080's details annotation
1.Annotation
ICBR annotation: mitochondrial import receptor subunit TOM7-1, putative, expressed
Blast result AT5G41685 : 1.20E-14
Blast annotation: Mitochondrial outer membrane translocase complex, subunit Tom7
2.Location
Scaffold: PH01000256
Strand: +
| Region | Start | End |
| gene | 50283 | 51788 |
| mRNA | 50283 | 51788 |
| exon | 50283 | 51788 |
| CDS | 50519 | 50770 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000306 | protein import into mitochondrial matrix, mitochondrial outer membrane translocase complex, large ribosomal subunit, transcription, DNA-dependent, |
| coexpression network | CFinderM000307 | amine metabolic process, quinone binding, copper ion binding, protein import into mitochondrial matrix, mitochondrial outer membrane translocase complex, Ribosome_biogenesis_in_eukaryotes transcription, DNA-dependent, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08038.11 | Tom7 | 41 | 80 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005742 | mitochondrial outer membrane translocase complex |
| GO:0030150 | protein import into mitochondrial matrix |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.