PH01000952G0400's details annotation
1.Annotation
ICBR annotation: prefoldin, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000952
Strand: -
| Region | Start | End |
| gene | 267193 | 269017 |
| mRNA | 267193 | 269017 |
| exon | 267193 | 269017 |
| CDS | 268131 | 268511 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001546 | calcium-dependent cysteine-type endopeptidase activity, mechanically-gated_ion_channel_activity GH17 Glycoside_Hydrolases CBM43 Carbohydrate-Binding_Modules MYB-related Transcription_Regulator(from iTAK) endoplasmic reticulum, integral to membrane, |
| coexpression network | CFinderM001694 | TKL_CTR1-DRK-2 (from iTAK) mitochondrial respiratory chain complex IV, mitochondrial inner membrane, Steroid_hormone_biosynthesis Fatty_acid_elongation Biosynthesis_of_unsaturated_fatty_acids cytochrome-c oxidase activity, histone acetyltransferase activity, transcription cofactor activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005783 | endoplasmic reticulum |
| GO:0006886 | intracellular protein transport |
| GO:0016021 | integral to membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.