CFinderM001546's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
calcium-dependent cysteine-type endopeptidase activity,0.009511608GO:0004198
mechanically-gated_ion_channel_activity0.009511608GO:0008381
GH17 Glycoside_Hydrolases0.016205679GFam
CBM43 Carbohydrate-Binding_Modules0.016205679GFam
MYB-related Transcription_Regulator(from iTAK)0.033037785GFam
endoplasmic reticulum,0.04184573GO:0005783
integral to membrane,0.04184573GO:0016021

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000006G3670Fibronectin type III domain-containing proteinAT3G24440 (4.00E-124)
PH01000062G0240calpain-type cysteine protease familyAT1G55350 (0)
PH01000668G0460histone mono-ubiquitination 1AT2G44950 (2.00E-171)
PH01000952G0400-- (-)
PH01001348G0440O-Glycosyl hydrolases family 17 proteinAT5G24318 (5.00E-107)
PH01001553G0280-AT2G48060 (0.00E+00)
PH01001661G0060Homeodomain-like superfamily proteinAT4G39160 (3.80E-36)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM001017calcium-dependent cysteine-type endopeptidase activity,
mechanically-gated_ion_channel_activity
RNA_degradation
details
CFinderM001175SWI/SNF-SWI3 Transcription_Regulator(from iTAK)
details
CFinderM001457mRNA_surveillance_pathway
Diterpenoid_biosynthesis
CAMTA Transcription_Regulator(from PlantTFDB)
protein binding,
mechanically-gated_ion_channel_activity
details
CFinderM001525MYB-related Transcription_Regulator(from iTAK)
details
CFinderM001694TKL_CTR1-DRK-2 (from iTAK)
mitochondrial respiratory chain complex IV,
mitochondrial inner membrane,
Steroid_hormone_biosynthesis
Fatty_acid_elongation
Biosynthesis_of_unsaturated_fatty_acids
cytochrome-c oxidase activity,
histone acetyltransferase activity,
transcription cofactor activity,
details
CFinderM001729mRNA_surveillance_pathway
CAMTA Transcription_Regulator(from PlantTFDB)
protein binding,
transferase activity, transferring acyl groups,
details
CFinderM001782ubiquitin-dependent protein catabolic process,
ubiquitin thiolesterase activity,
mechanically-gated_ion_channel_activity
SNF2 Transcription_Regulator(from iTAK)
details
CFinderM001785transferase activity, transferring pentosyl groups,
Nicotinate_and_nicotinamide_metabolism
Diterpenoid_biosynthesis
details
CFinderM001797proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
mediator complex,
regulation of transcription from RNA polymerase II promoter,
ATP hydrolysis coupled proton transport,
MYB-related Transcription_Regulator(from iTAK)
RNA_polymerase_II_transcription_cofactor_activity
hydrogen ion transmembrane transporter activity,
Phagosome
Oxidative_phosphorylation
details
CFinderM001819SNF2 Transcription_Regulator(from iTAK)
cis-Golgi network,
mRNA_surveillance_pathway
details
CFinderM001820mediator complex,
CBM43 Carbohydrate-Binding_Modules
GH17 Glycoside_Hydrolases
details
CFinderM001849SNF2 Transcription_Regulator(from iTAK)
mediator complex,
regulation of transcription from RNA polymerase II promoter,
details
CFinderM001879cis-Golgi network,
details

4.Expression profilings