CFinderM001175's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
SWI/SNF-SWI3 Transcription_Regulator(from iTAK)0.001312131GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000006G3670Fibronectin type III domain-containing proteinAT3G24440 (4.00E-124)
PH01000059G0350LSD1-like 3AT4G16310 (0.00E+00)
PH01000287G0640RNA polymerase II transcription mediatorsAT4G00450 (0.00E+00)
PH01000288G0970Major facilitator superfamily proteinAT2G32040 (1.20E-90)
PH01000954G0660dentin sialophosphoprotein-relatedAT5G07980 (2.10E-37)
PH01001132G0230RING/FYVE/PHD zinc finger superfamily proteinAT5G16680 (6.70E-73)
PH01001537G0170-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000068cellular protein modification process,
ubiquitin-protein ligase activity,
Ubiquitin_mediated_proteolysis
binding,
intracellular,
protein binding,
CE8 Carbohydrate_Esterases
GH28 Glycoside_Hydrolases
Alfin-like Transcription_Regulator(from iTAK)
SWI/SNF-SWI3 Transcription_Regulator(from iTAK)
TORC1_complex
details
CFinderM000117nuclear chromosome,
Glycolysis_/_Gluconeogenesis
Ino80_complex
ATP citrate synthase activity,
phosphoglycerate kinase activity,
succinate-CoA ligase (ADP-forming) activity,
details
CFinderM000912intracellular,
SWI/SNF-SWI3 Transcription_Regulator(from iTAK)
Ribosome
translation,
cellular protein modification process,
structural constituent of ribosome,
Ubiquitin_mediated_proteolysis
details
CFinderM001520SWI/SNF-SWI3 Transcription_Regulator(from iTAK)
Glycine,_serine_and_threonine_metabolism
L-serine biosynthetic process,
RNA metabolic process,
Methane_metabolism
phosphoglycerate dehydrogenase activity,
glycopeptide_alpha-N-acetylgalactosaminidase_activity
details
CFinderM001546calcium-dependent cysteine-type endopeptidase activity,
mechanically-gated_ion_channel_activity
GH17 Glycoside_Hydrolases
CBM43 Carbohydrate-Binding_Modules
MYB-related Transcription_Regulator(from iTAK)
endoplasmic reticulum,
integral to membrane,
details

4.Expression profilings